FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003643802

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003643802
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13
Sequences flagged as poor quality0
Sequence length140
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGACACCCTGGAGAAGCCGAAACCAGAGAGCCTTTTGTTTTCTCTTTT215.384615384615385No Hit
GCTGGAGATGGTGGTGAACAGCCTGTTTGCATTTCTTGGAAGAAGATCTT17.6923076923076925No Hit
CTTCACCACCACGGCCGAGCGGGAAATCGTGCGTGACATTAAGGAGAAGC17.6923076923076925No Hit
CCCAGGGTCACCTCAGTCTGAGCAAGGTTGCTGAGAGCTCCCACAGGGCC17.6923076923076925No Hit
CTGCGGAGAGGAGTCCTGAGTATGGAGGAGATGTGTCTCATGGAGAAGCA17.6923076923076925No Hit
AGACTCCATCTCAAAACAAAACAAAAGCCAGGCGTGGTGGCTCGCGCCTG17.6923076923076925No Hit
GAGTGCAGTGGTGCAATCTTGGCTCACTGCAACCTCCACCTCCCAGTTCA17.6923076923076925No Hit
CCCTTATACTTTATAATATTCTAAAATGTGGGCCAGGCATGGTGGCTCAC17.6923076923076925No Hit
TCCGGAGAGGGAGCCTGAGAAACGGCTACCACATCCAAGGAAGGCAGCAG17.6923076923076925No Hit
GGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT17.6923076923076925No Hit
GTACTTTGCTTACACAAGGCCAATTTAGTGCTTTCAGAACCCTCCAGTCT17.6923076923076925No Hit
GAACAGTTTCTGCTGCAGCGGCTGGCAGACGGGGCCATCGACCTCTATGC17.6923076923076925No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)