FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003644021

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003644021
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14
Sequences flagged as poor quality0
Sequence length140
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AATCAGTGGTGGGAACGACAAACAAGGTTTCCCCATGAAGCAGGGTGTCT17.142857142857142No Hit
ATTCTCAGGTGGGTTTTTGAGAATGAATGTGCAGAGTTTATGATGTGTGT17.142857142857142No Hit
TCTAAGTACGCACGGCCGGTACAGTGAAACTGCGAATGGCTCATTAAATC17.142857142857142No Hit
AGCAGGGACAGCCCCAGACATCACACCACCCATCGGCACAAGCCCGACAT17.142857142857142No Hit
CCTCCGACTTTCGTTCTTGATTAATGAAAACATTCTTGGCAAATGCTTTC17.142857142857142No Hit
AGTAGAGACAGGGTTTCACTGTGTTGCCCAGGCTGGTCTCAAACTCCTGA17.142857142857142No Hit
CAACAGGGCTGCTGGTCACAGCTCAGTGCGCGATGCCTTGGCCACAATCA17.142857142857142No Hit
GTTGATGATGGCAGTAAAGATCAGACCTCAAAGGTAGCTTTTAAATATTG17.142857142857142No Hit
GTTGTGCTCGGTGCGCTGAGCTCCGCGGCTCCGCGAGCCGGTTCCGTCCC17.142857142857142No Hit
GCCGGGGCCGGAGAGGGGCTGACCGGGTTGGTTTTGATCTGATAAATGCA17.142857142857142No Hit
GGACTATGCTGGTAATACTTACATGAATTGGGTGAATTCCTCTCTTCTTG17.142857142857142No Hit
TACCTGGGCTTCCTCCTCTTCAGTAAAGTCATTTTTGATATTGAAGGTCT17.142857142857142No Hit
AAACAGCCCTGCTGCAAAGATGGTCAACGTACCTAAAACCCGAAGAACCT17.142857142857142No Hit
TGGTTATGGCAAAATCAATAAGAAGCGAATTGCTTTGACAGATAACGCTT17.142857142857142No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)