FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003644035

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003644035
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences33
Sequences flagged as poor quality0
Sequence length140
%GC52

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTAAAAGATTCCGTGAATTTGTTGTTGTTGTTGTTGTGCAAAGGATAAAA39.090909090909092No Hit
CCCATGGAGTGAGGTAGTATCACATGAAAATTATTTCTCCGTGTATGTGT26.0606060606060606No Hit
GCCCTGGCATTGAAATAGCCGTGGCGGCTTGCATTCCGGCGGCGCATAGA26.0606060606060606No Hit
CCAGAGACCCGGGCAGAACCAGGCGTCCAGGACGCCGCTGACCACCCTCA26.0606060606060606No Hit
GTCCGGCGATGGCGCCGAGGTTCAAGCCGTCGACGAGGCGCAGTCCGAAG26.0606060606060606No Hit
ATGCCAGATAATCTGCACATCATTTGAAAATTCATATTGTGCCAAAAATG13.0303030303030303No Hit
GAATGGAATTGTCATCAAAAGGAATTCAAAGGAAACGTCATCAAATGGAA13.0303030303030303No Hit
CAGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGTACT13.0303030303030303No Hit
GTACTGATTGCCGAGCAAATCTGTGAATGGCGACTATGCGCCTAGTCAAC13.0303030303030303No Hit
CCCATGCTCTGTTTGAGATGGTTACGCAGCACCTCCACGCCTTCACCTGT13.0303030303030303No Hit
GGCATCGATACCGGATCCGAGAAGTTCCCGGGGGCTGCTGTGCTCGGCGT13.0303030303030303No Hit
GGGCAGCGCCGAGGAAGGTCTGCACGCTCTTGGCGGTGAGCGGCGCGCGA13.0303030303030303No Hit
CTTATACACATCTCCGAGCCCACGAGACTGGGACGGCAGAATCTCGTTTT13.0303030303030303No Hit
GCATAATGAATTAACTAGAAATAACTTTGCAAGGAGAGCCAAAGCTAAGA13.0303030303030303No Hit
GCTAGGAATAATGGAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAA13.0303030303030303No Hit
CGTGCCCACTGCGCTTCCGTCACACAGGCCATCGCGTCAAAAGTGCCGGT13.0303030303030303No Hit
GTGCTTGGCTGAGGAGCCAATGGGGCGAAGCTACCATCTGTGGGATTATG13.0303030303030303No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGT13.0303030303030303No Hit
AATTAGGACATTTTCAGGTAAACTACCACTCAGAACATTTACATCCAAAA13.0303030303030303No Hit
GGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTAAAAT13.0303030303030303No Hit
GTTGACTTCGGCCATCTGAGAAGACGCATCGCTGTCCTGCCTGCCCATAC13.0303030303030303No Hit
ACCTTCCACGTGGTCAACATCTGGCTTTCCGTGGAGGACCACTCCGGCTA13.0303030303030303No Hit
CTGCTACTCCAAGCTCAAGGAGCTGGTGCCCAGCATCCCCCAGAACAAGA13.0303030303030303No Hit
CCTTGCAGGCTTCTGAATTCCCTTCTGAGTTAATGTCAAATGACAGCAAA13.0303030303030303No Hit
GCCTATGTCTTCGCCGATGTCCTTGGCCGCACGCTGAGCCACAAGGGCTA13.0303030303030303No Hit
CTTATACACATCTCCGAGCCCACGAGACTGGGACGGCAGAATCGCGGTTG13.0303030303030303No Hit
GGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTAATCT13.0303030303030303No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)