FastQCFastQC Report
Tue 10 May 2022
EGAF00003644069

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003644069
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences724649
Sequences flagged as poor quality0
Sequence length140
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTA7930.10943229066761977No Hit
CTCTAGAACTGTACGCTGTACCTGCATCAGCATTAGTAATCAACCTGTTA7570.10446436826656769No Hit
GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC7280.10046243077683127No Hit
GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT7250.10004843724341025No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)