FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003644150

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003644150
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences19
Sequences flagged as poor quality0
Sequence length140
%GC58

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTTGGGCTCCTCTGGGTTGTACTGCGTGTGTGCGTGTGTATCTCCATGTA315.789473684210526No Hit
CGAGACCTCTACAGCATGTCCTTCTTCACCGAGGTTTAGAGGGTGGTCCC210.526315789473683No Hit
GTTCGCTGGTCGGCACGCGCCAGGATTTAACTGAAGCCTTCCAGTTTGCC210.526315789473683No Hit
GTCTTGATCCATGCTGCTTGCACAGCCTAGCAAGCTTGGCGAGACCCGGA210.526315789473683No Hit
ACCCTGGCCCGGGCCCGCCGCGGCCGCCGAGCGCCCACGGGGCGCGAGGC15.263157894736842No Hit
CATTTACGGTTACGTGCCGATTGTGGTCGCGAAATGCGGCGTTTTTCTCA15.263157894736842No Hit
CTGTTTCGACTGAACTTGCCGGGGAAACTGTCCACGATGTTCGCATAGAG15.263157894736842No Hit
TACCAGCGCGGGCTCGGCGAGGTGGCGCTGGCGGCCCTCCCGCCGGAGCT15.263157894736842No Hit
GTGTCGGCACGGACGGGCGCCCTTGTCCTCCGGAGTTTTCCCTTTTGACC15.263157894736842No Hit
GGCCCTGCGGCTTGCGCTGTGGGTGACCCAGCAGTCCGGAGCACTAGATC15.263157894736842No Hit
CTCGACGGCCGGGTCCTGCACGCCGTCCTCATCGAGATCTTCACCGACGA15.263157894736842No Hit
GGAAACGGTCACTTCGCTGAACCTGATCGACGGCGAAGCGCGTGTGCACC15.263157894736842No Hit
GTAAATCAGGTGGGCAGGAGAAGCAGAGGAAGAGGCTGCAAATGTAGTTG15.263157894736842No Hit
GCCTCTGGCTCTTTCGATGGGACCATAAGAATGTGGAACAGCTCAAGCAA15.263157894736842No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)