FastQCFastQC Report
Tue 10 May 2022
EGAF00003644198

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003644198
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences227219
Sequences flagged as poor quality0
Sequence length140
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTGTATAAGCATATCAATATTAAAAAGCAAGCAAGCAGAATTTGGAATTC3830.16855984754796033No Hit
GTACATGGGATTCCTGAAGCTGACAGCATTCGGGCCGAGATGTCTCGCTC2650.11662757075772713No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)