FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003644432

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003644432
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences26
Sequences flagged as poor quality0
Sequence length140
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCCAGGGGACTTGGCTATGCTGGAAAGTCAGACCTTATCTGCACTTCTGA27.6923076923076925No Hit
GTACTGAGCAGGATTACCATGGCAACAACACATCATCAGTAGGGTAAAAC27.6923076923076925No Hit
GTTAGGGCAGCGTCTGAGGAAGTTTGCTGCGGTTTCGCCTTGACCGCGGG27.6923076923076925No Hit
TCTTTGTGAATTTCCACCTCCCGGATCTTGCTGTGGGCACCATCTTGCTC13.8461538461538463No Hit
GCCCTTCCGTCAATTCCTTTAAGTTTCAGCTTTGCAACCATACTCCCCCC13.8461538461538463No Hit
GTTCCGGGGGGAGTATGGTTGCAAAGCTGAAACTTAAAGGAATTGACGGA13.8461538461538463No Hit
GTCTTCGGTGGCACCGTGTTCCCGACCGTGGGCGAGGACCGCCTGCTCAC13.8461538461538463No Hit
ATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACTGTCTCTTATACAC13.8461538461538463No Hit
ATATAGATTGGCGCTAGTAGATCACAGAACAACCGCCGCATACGGCCGAT13.8461538461538463No Hit
AGATTGCTTTTTCCTCATCTAAACTTTTATTTCCTGTCTCTTATACACAT13.8461538461538463No Hit
GCCCAAGGTGGCAAAAGGCTTGATCCCTAAACAAAGCCTTGCACCCAAAG13.8461538461538463No Hit
AAACTTGCCTATTAACACTGTTTTTGATGCATCCCAGAAATTGTAGTATG13.8461538461538463No Hit
GTTGTAGGGACGTGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTACA13.8461538461538463No Hit
TTGTGTGCCAGGCCTCTCTGGGTCCCCTCCCTGGCCTTTGCCTTCCTCTC13.8461538461538463No Hit
GCCTGTTCCAAGACCTGTGGGATGGGCATCTCCACCCGGGTTACCAATGA13.8461538461538463No Hit
GGCTGGAGTGCAGTGGCACGATCTTGGCTCACTGCAACCTCCGCCTCCCA13.8461538461538463No Hit
CACTTAAGGAGTTTCAAAAGACAACTGAAAGCTTCAGAGGAAACTTCAGA13.8461538461538463No Hit
CTGATCTATAGCTTTAGGTGGGTGAGCCACAAAGAAATTTGGACAGACAT13.8461538461538463No Hit
GGCCAGTATGTTTGCGGCGAATCCGTCCGCATGGTGGCCGCAGGGTTTCA13.8461538461538463No Hit
ATTTGATTCCATTCGATGATGATTCCATTCGAGTCCATTCGATGATTTCA13.8461538461538463No Hit
ATGTAGTGTTCTTTATCTAAATAAAAGAAGTATTAATTCCAAGCTAAATT13.8461538461538463No Hit
CTCTCCAAAGCTGGCCCCATCCTCTCCCCCAGGCCCCAGTTGGAAGGACT13.8461538461538463No Hit
GCCTTAGAGCCATGACCGAAACTTGATATTTTTTTCTTTCATGAGTGTCC13.8461538461538463No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)