FastQCFastQC Report
Tue 10 May 2022
EGAF00003644563

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003644563
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences51220
Sequences flagged as poor quality0
Sequence length140
%GC57

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CACACACACACACACACACACACACACACACACACACACACACACACACA630.12299882858258493No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT580.1132370167903163No Hit
GTATAAAATCAGGCAGTTTTTGATCACGTTTATTGTAAGCCGTCAGCATC560.10933229207340882No Hit
GGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAG550.1073799297149551No Hit
AGCTAATACATGCCGACGGGCGCTGACCCCCTTCGCGGGGGGGATGCGTG550.1073799297149551No Hit
ATGCAGGCTGCCGCCGCGCGTGGCACCCAGCAGCAGCACCGTCGCGACCA540.10542756735650136No Hit
GTATAAGGTGATCGCAGGTTGTGCAATCATTGCTCAAAAGGGTGTACACC540.10542756735650136No Hit
GTGTTGAAGGGCGAGCCGCCGGCCTGCCGCGGGGGTGCCAGCGCGACGTC520.10152284263959391No Hit
CTTCAACACCATGCACCTGTGGTTCCTGTACCAGCTGTTCTGGCTCAGCG520.10152284263959391No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)