FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003644690

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003644690
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences71
Sequences flagged as poor quality0
Sequence length140
%GC51

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCTCGGGTGGCTGAACGCCACTTGTCCCTCTAAGAAGTTGGGGGACGCC34.225352112676056No Hit
CAGAAGGGCAAAAGCTCGCTTGATCTTGATTTTCAGTACGAATACAGACC34.225352112676056No Hit
GGACCGGGGTCCGGTGCGGAGTGCCCTTCGTCCTGGGAAACGGGGCGCGG22.8169014084507045No Hit
ATTCTAGAGCTAATACATGCCGACGGGCGCTGACCCCCTTCGCGGGGGGG22.8169014084507045No Hit
CCTACTGATGATGTGTTGTTGCCATGGTAATCCTGCTCAGTACGAGAGGA22.8169014084507045No Hit
AGCCAATGTTCCTCCACCGGGCGATGCTCCTCCACCAGGTGATGCCCCTA22.8169014084507045No Hit
GTTTATGGTCGGAACTACGACGGTATCTGATCGTCTTCGAACCTCCGACT22.8169014084507045No Hit
GGGACAGGCCAAGGATGATGGGGTTTTAATTTCTCTCCTGATCCATGGCA22.8169014084507045No Hit
TTCCAATTACAGGGCCTCGAAAGAGTCCTGTATTGTTATTTTTCGTCACT22.8169014084507045No Hit
GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGATTAATGAAAAC22.8169014084507045No Hit
CCATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTACCGGCCGTGCG22.8169014084507045No Hit
GTATTGGAGAACTAGGCGGTTGCTTACTAAGAAGTGTCTTGGAAACATTC22.8169014084507045No Hit
GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGA22.8169014084507045No Hit
TCGTTCGTTATCGGAATTAACCAGACAAATCGCTCCACCAACTAAGAACG11.4084507042253522No Hit
GTCCCAGGGTTTCAAGCACAAAACTGGGTGGCCATTTGGGCAGACACCGA11.4084507042253522No Hit
GCTTTATTCTGTTGTGGCAGGAGTTCCCGGGCCCCTGGGCACCACCTCTG11.4084507042253522No Hit
TGTGGCGGCCAAGCGTTCATAGCGACGTCGCTTTTTGATCCTTCGATGTC11.4084507042253522No Hit
GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT11.4084507042253522No Hit
ATTTTAAACAGGAGGGATCACGATCCTGACGCATCCCTCTGACAAATTGT11.4084507042253522No Hit
GAGTACATGGGAGCGGGCCCAGGCCTACCTCACTCTCTCCCTTGGCAGAG11.4084507042253522No Hit
CTGTGAAAGTCTGCATATTGATCAAGCTTCTCCCTCCCTTATCTGAAGGG11.4084507042253522No Hit
TCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAACCCAGCTCACGT11.4084507042253522No Hit
GTCCTAGATGTAGTAGAGCGGCACCTCGCCACACAGGGTGCTCACGGCCA11.4084507042253522No Hit
CAACGCAGAGTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAA11.4084507042253522No Hit
GAAACGGGGCGCGGCCGGAAAGGCGGCCGCCCCCTCGCCCGTCACGCACC11.4084507042253522No Hit
GTTCTGGAGATGAGCATAGGGGCGCCGGAAGCCCAGCAACGCCTGGCCCT11.4084507042253522No Hit
GACCAGCCCGAAGGAGAGACACATCATTGTGGCCTGTGAAGGGAGCCCAT11.4084507042253522No Hit
GATTAATGAAAACATTCTTGGCAAATGCTTTCGCTCTGGTCCGTCTTGCG11.4084507042253522No Hit
TTTCAGCTGCGAGCCTTCTTTGATGGTGACAGAACAGGCGATGACAGGCC11.4084507042253522No Hit
GCTAAGAGCATCGAGGGGGCGCCGAGAGGCAAGGGGCGGGGACGGGCGGT11.4084507042253522No Hit
GTTTATGGTCGGAACTACGACGGTATCTGATCGTCTTCGAACCTCCGACG11.4084507042253522No Hit
GGTGAGGTTTCCCGTGTTGGGTCAAATTAAGCCGCAGGCTCCACTCCTGG11.4084507042253522No Hit
GGGTACTTGAGATTAGGGAGTGGTGATGACCTGTCTCTTATACACATCTG11.4084507042253522No Hit
ACTGACATCTGCTAGTGATGATCTGGTAATATACAACCTGTCCAGTAGCC11.4084507042253522No Hit
TCCATTAACAATCGCAAAGGGAAACTTATCTTCTTTTATGAATGGAGCGT11.4084507042253522No Hit
AAAAAAGACCTAAAACAAGCCCACCGGCGCTGACCCCAAACTATCGTTGG11.4084507042253522No Hit
ATCATCTGCTTCAAGCTCCTCAAGCAGCCGAAGCACTGTTTTTTCATGTC11.4084507042253522No Hit
GAAAAGTTACCACAGGGATAACTGGCTTGTGGCGGCCAAGCGTTCATAGC11.4084507042253522No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTGATTA11.4084507042253522No Hit
CCATGCCCCAAACAGGTTTGAACACAAATCTTTCGGATGAAAATTAGAGA11.4084507042253522No Hit
TAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTACTCTGCGTTTATACCAC11.4084507042253522No Hit
AATACAGACCGTGAAAGCGGGGCCTCACGATCCTTCTGACCTTTTGGGTT11.4084507042253522No Hit
TCTTGGAAGCCTGGGAGACTTACCTTGAAATTGAATGCAAATAGGACAAA11.4084507042253522No Hit
GTCTTAAATGTTTGATGAAAAACAAGGAAAACAGCACATTTAGTGTTAGT11.4084507042253522No Hit
GCCTACTCAGTTTCTCTTCCTCCTGGGTGTGTTGGGCATCTTTGGCCTCA11.4084507042253522No Hit
TATTCAAGCAGGTGAATAATAGATCTTAATTTCACTTTAGGAAGATGATG11.4084507042253522No Hit
GGTCCACCTTTTTCTTTGGTCACTGGATTAACATCATCTGGAAATTTTTC11.4084507042253522No Hit
TGCTTTTAAGGCTATTAACCAGGGTGGCCTTACATCAGTAGCTGTCAGAG11.4084507042253522No Hit
CCCCAAGTTGGGGGCCCCATCCCCTGGGGACAAGCCCATCTTCGTACCTC11.4084507042253522No Hit
TCTTTAAATTATGAGTATTAAATATGACTTCTGAAACTGCTGAGCTCTAC11.4084507042253522No Hit
GGCGGGCGGTCCGCCGCGAGGCGAGCCACCGCCCGTCCCCGCCCCTTGCC11.4084507042253522No Hit
ATGAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGA11.4084507042253522No Hit
TTCCAGAGCTCAAGGCCAACCCCTTCAAGGAGCGAATCTGCAGGGTCTTC11.4084507042253522No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTGGTTGTTAA11.4084507042253522No Hit
GTCTTGTGTTGTTGCCCAGGCTAGAGTGCAGTGGTGTTATCTCGCCTCAC11.4084507042253522No Hit
GCCGGGGGGCGGGCGCCGGCGGCTTTGGTGACTCTAGATAACCTCGGGCC11.4084507042253522No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)