FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003644720

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003644720
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18
Sequences flagged as poor quality0
Sequence length140
%GC65

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGACCGGATAGCGCGCCAGCCCCGCCTGCACGTTGGGGCTGCCGGGATTG316.666666666666664No Hit
ATCCTGCGCCGCTACGATCGCGTGAGCGAGCCTGCAGGCACGCCGGGGCA211.11111111111111No Hit
GGCCGGCGGTGATGCCGTTGGCGATCTCGCTGCTGACGCCACGGGCGGCT15.555555555555555No Hit
TAAGTAATCCGCGGAACAATCGCGCTTAACCAACGTCACCAGACGGCACT15.555555555555555No Hit
GTCTGGACCTCTGGCGACAGCGCCGCCTCGATCAGCTTGAAGGCCAGCTC15.555555555555555No Hit
GCAGTTCTTCCGCTCAGCCGGTGGGGTGATGGGTGCCGTACAGCAGCGGA15.555555555555555No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG15.555555555555555No Hit
TCCGGGCCTTCGTCATCGAAGCGCGTCAGCGCGATGCCGGTATCCACGTG15.555555555555555No Hit
GATCTGCGTACTCCTTCACTTGCTGCACAAACGGGTTTTTGGAGGAAAAA15.555555555555555No Hit
GTCGAGAAGGTCACGCCGGAGATCCGGCAGTTGGTCGACGACATGTTCCA15.555555555555555No Hit
CGAGGAGCGAACCTGCGACGGTGGGATTGCGCGCTTCATCGATACCGTCG15.555555555555555No Hit
CGGCATCGCCGTGAATCGGGGAGCTTTCGGATACGACGACACTTTGGCCG15.555555555555555No Hit
GCGCTTGGTAGTGCACCGATGATCGCGTCGGCTGCCGTCGGGTCTCTGGC15.555555555555555No Hit
CACCTGCGCGAGCGGCGAGCCTGCTCAGCTGGTTGCTTGGAGTTGTCGTG15.555555555555555No Hit
ATTGACACCAGCGTAGATGCCGTAGCCAATGCCGCCAGCTACAACGAGGC15.555555555555555No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)