FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003644725

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003644725
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences35
Sequences flagged as poor quality0
Sequence length140
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGTTTCACTGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATC38.571428571428571No Hit
CCCCTCCCCACATCAAGCCCGAATGATATTTCCTATTCGCCTACACAATT25.714285714285714No Hit
CGCTGACTCGCCGCGCATTCGGCGTCAGGGTGCGGATCGAGCCGGTGAAG25.714285714285714No Hit
CAGTTGGGATTTAACATCCGAGGAGGAAAGGCCTCCCAGCTAGGCATCTT25.714285714285714No Hit
GCTGAAGCCTGTCCTTGGGAATTGGATGCATGGCACTCATATTCTCCAGC25.714285714285714No Hit
CTTCTTGGCATTTTCTCTAAGTCTCTCAACTGAAGGCAGAAGTGCTGCTC25.714285714285714No Hit
GCTCTTTAGTTTAATTAGATCTCATTTGTCAACTTTGGCTTTTGTTGCCA12.857142857142857No Hit
CCCTGAAGTTTATATTCTTATCCTACCAGGCTTCGGAATAATCTCCCATA12.857142857142857No Hit
CTTCTAAACCTGGAGTGGAAGAACACGATTCCTGCTGGTCTGTGCTTGAG12.857142857142857No Hit
GGCTCAGAAGTCCGAAGCAGGAAAACCCGAGACCCTGATCGAGGTGCGCG12.857142857142857No Hit
AAATAAAGCTGCAGCTCCGTGCAGGTGTCGGGACCAAAAGCAGCTGCCCT12.857142857142857No Hit
GTCAGGTGGGTGCCAGGCCCTGGCCGTGGCGAAAGAGCCGGCGGAGCCGG12.857142857142857No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT12.857142857142857No Hit
GACTTGTTGAGTAGAAGTGCAGACTGATGCTTTAAGACTCAGGGAGAGAA12.857142857142857No Hit
CATCTTCAGCTGGCTTCTTGATGTCCTGGAAGAGAGCGCGGCCGCCACGC12.857142857142857No Hit
GGTGTATATAATGTCTATAATTCTATGCAGAATCTGAGTCTTTGAAGGGA12.857142857142857No Hit
CACCTGCACGGTGTGGCTGGCGGCCTACGGACTCTTCACCCTCTGCGAGG12.857142857142857No Hit
GGCCCCAGAACCCTCATGTTTGGGTCCGACTCCCACATTGCCAGAGACTA12.857142857142857No Hit
TCGGAACTGAGGCCATGATTAAGAGGGACGGCCGGGGGCATTCGTATTGC12.857142857142857No Hit
CTTCCTTCAGAGATTCCTTAGCATATTTCTCTGCTTCTTCTCTTATATCT12.857142857142857No Hit
GGGCAGAACCCAGGGCATGAAGATCCAAAAGGGCCTGGTTCAGCTTTTTC12.857142857142857No Hit
TTTGCAGGGGGGAGCCAAAAGGGTCATCATCTCTGCCCCCTCTGCTGATG12.857142857142857No Hit
CCCCATCGTTATCCTCTCTGCATTCATGACAGGGTGTTGGCAACTCGCTT12.857142857142857No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTG12.857142857142857No Hit
GCCTAAACTGGATCAAGTACAGTGTCACTTTGACCACATCCTGCTCGCTA12.857142857142857No Hit
GCATTTTATTGGATATGGCTACCAGAATCTCAGGGTAAGTTGAGATTGTT12.857142857142857No Hit
AGGTAGGGGTGGGAGGTGGGCGAGCAGAAGGCCCTAGTTCTAGCAGCAAG12.857142857142857No Hit
ATTTTAAGTGCTGTGGGGCTGCTAACTACACAGATTGGGAGAAAATCCCT12.857142857142857No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)