FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003644726

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003644726
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences35
Sequences flagged as poor quality0
Sequence length140
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCCGGACACGGTGGCTCACGCCTGTAATCTCAGCACTTTGGGAGGCGGA38.571428571428571No Hit
GCAATATGGTTTGGGTAATGCAGTTGGTTAGCTGTCTCCCCATCCTCCCA25.714285714285714No Hit
GGGCACCTGCGAGCAAGGTCCTTCCATAGTGACGCCCCCCAAGGACATCT25.714285714285714No Hit
GGCAATAGGAGCTCATTGGTCAGCTTGGTGTGAGGAGTGTTGGGCAGAAT25.714285714285714No Hit
GTCCCTGGCCTGCCTGGGTCCAGATCTGCTAATGCTTTTTAGGAGTCTGC25.714285714285714No Hit
GGTGAAACCCATGTCGCTGGCATAGGCCGGCAACTGCTCGGCCATCTCGC25.714285714285714No Hit
TCTTTATATTGCTCCAATGAAAAGGGTAGGGAGGAGAAGAGCATCTGATA12.857142857142857No Hit
GCTCTTCGTAATAGAAGGTAGCTATAATCCCCTCAACAAAATAACCACTG12.857142857142857No Hit
GACCAGTCACGGAGTGGAAGCTATCATGATCAAATCTGATTTCTCCACGG12.857142857142857No Hit
AAAACATCTTGCAGACAGAGTGGCCATGTATGTGCATGCATATACACTCT12.857142857142857No Hit
GGATTAAAGACTTAAATATTAGACCTAAAGCCATAAAAACCCTAGAAGAA12.857142857142857No Hit
GTAGAAAATTGAGGCTCAGAGAAAACAGTAATCAATCTGGAAATTGAGCA12.857142857142857No Hit
CCATGCATCCGAAGTGCACAGAGTGTTCATGCAAACTAAACGCGGGCGCC12.857142857142857No Hit
CTCCCAGATTCGTCAGAATTATTCCACCGACGTGGAGGCAGCCGTCAACA12.857142857142857No Hit
AAAATAATCCGTTTAATTGAAAAACCTGGAGGATACTATTCCACTCCCCC12.857142857142857No Hit
CACGTTGGCAGTGGGGACACGGAAGGCCATGCCAGTGAGCTTCCCGTTCA12.857142857142857No Hit
GTCTGTGGTCTTTGGAGAACACACACTGCTGGTGACGGTGTCAGGACAGA12.857142857142857No Hit
AACGCAGAGTACATGGGCAATTATCCAGAAGTTAATCACAAGTAACACGG12.857142857142857No Hit
GTATTAGGATTAGGATGGTTGTGAAGTATAGTACGGATGCTACTTGTCCA12.857142857142857No Hit
GGCTCCACTCCTGGTGGTGCCCTTCCGTCAATTCCTTTAAGTTTCAGCTT12.857142857142857No Hit
GCTATGATGAACACATCCTACTGTGGGACACACGAAACATGAAGCAGCCG12.857142857142857No Hit
GGCTCTGGAAGGCGTGAGCCACTTCTTCCGCGAATTGGCCGAGGAGAAGC12.857142857142857No Hit
GATTTCTGTGTATTTCCAAAACTGACTTTTAACTACCGGCAGCGTGGGAT12.857142857142857No Hit
GTGTAGTACGATGTCTAGTGATGAGTTTGCTAATACAATGCCAGTCAGGC12.857142857142857No Hit
GTATTAGGATTAGGATTGTTGTGAAGTATAGTACGGATGCTACTTGTCCA12.857142857142857No Hit
TTCCACATCCAGGTCCAGCCCATCGTGGATGGTGCGCTCACCAAACCGGC12.857142857142857No Hit
TTCTTACTCTCAAAATGCTTAAAGTTTTAATTCAATAAAGGCACTTTCAA12.857142857142857No Hit
GTGTGGTACAGATCATAGCGTGTTATCATCCAGACCTGAGCAGACGCGAC12.857142857142857No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)