FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003644733

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003644733
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18
Sequences flagged as poor quality0
Sequence length140
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TCTTTGACCTGGGCGGGGGCACCTTCGACGTGTCCATCCTGACGATCGAC211.11111111111111No Hit
GACCGAGATGAATCCTCACCATATGCTGCTATGTTGGCTGCCCAGGATGT211.11111111111111No Hit
GAGTCCCTCTTCCAGGGGGGATCCCCATTGGGGGACCCATAGGAGGTCTC211.11111111111111No Hit
GGGTAGGCACACGCTGAGCCAATCAGTGTAGCGCGCGTGCAGCCCCGGAC211.11111111111111No Hit
GTGTGGTGCTGAAAAAAAATGTATATTCTGTTGATTTGGGGTGGAGAGTT15.555555555555555No Hit
CGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCA15.555555555555555No Hit
GTGCAGTGGAGAAATGTTGCGCTCCGTCAGGAAGCTGGGCTCTTGCCATG15.555555555555555No Hit
GAAGGGAACGATTGACCTGTGAATTCTTTGCCGTCTAAGGCAGTTGTTTA15.555555555555555No Hit
GAGTCGGAGTCTCTGTCGCCCAGGCTGGAGCGCAGTAGCGCGATCTCGGC15.555555555555555No Hit
CCCTGAGGTGCTGGGCCCTGGGCTTCTACCCTGCGGAGATCACACTGACC15.555555555555555No Hit
GATTTTACCAAAACTTTAGACAATTTTAGGCCAGCTAAAACACTACATGG15.555555555555555No Hit
TCCCAATAGAGTTTTGGATGTCATTTTAGAAGTGTTTGAATGCAGGCCAG15.555555555555555No Hit
GAATTCCATCTGCGGATAACCGTCTGGTCCTTGTGCACAAAATCCGTGTC15.555555555555555No Hit
GAATTTGCATTGGATTTTTTTTTTTTTTCTTAGGGTCTTGGTACAGCTCA15.555555555555555No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)