FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003644747

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003644747
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences31
Sequences flagged as poor quality0
Sequence length140
%GC68

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GAGTAGAACTCCACCCGGCGCATCTCCTCGGCGTCGGCGACGCCGGAGGC39.67741935483871No Hit
ATCAACACTAAGTCCGGCACGCCACGAATCAGCGTGGTGTACCCTTCGAA26.451612903225806No Hit
CGCCGGGAGTACCCCACGGCCATCGGCCCGGTCGACATCCTGTGCCGCGA26.451612903225806No Hit
ACGAACACCCCGTCGAAGACCCGCTGCCAGGAACCCCGGGCCAGGAGGTG26.451612903225806No Hit
AACTGCAGCCGAGCCTCCTCCAATTGCCTGGACACATCCTTGATCATGGA26.451612903225806No Hit
CAGCTGACCTGCGTCTTCGTCGACCACGGCCTCCTCCGGGAGGGTGAGGC26.451612903225806No Hit
GTCACGACGTAGACGAGGCAGAAGGCGCCGATGAGGCCGGTGGCGGCCAG13.225806451612903No Hit
ATCTCCGAGGGGATGGAAGAGCCCCTGGAGATGGTGCTCACCGACTGGAA13.225806451612903No Hit
GTCCGTCGGCGCGTCGAGCACCGGGAACGGCCCCCGGTCGAGCATCGCGC13.225806451612903No Hit
CACCTGGAGGACCGCCGCGGGCGCCGCAAGGGGTTCCCGCTCGGGCCCGG13.225806451612903No Hit
CTCCGGCATCGCGGAGGTCGACGCCGGGCGTCGCGAAAAACGCGAGGACC13.225806451612903No Hit
GTTGCAGTGCCGCGACGAACAGCTCAGAGCGGGCGGTGTCAAGCTCCTCG13.225806451612903No Hit
CCACGAGGAGGTTACGGCCGAGGGCCATCTCGCCACCGTCGGTCGCGGGA13.225806451612903No Hit
ACATCGCCCCGGGCAGCTCTGCGACGGCGGCCGCGACGGCGTCCGGCCGC13.225806451612903No Hit
TCGCTGCCCCACGCGGTGCTCATGATGATCCCCGAGTCGTGGGAGAACGA13.225806451612903No Hit
GTAGAGCCCCAGTCTTCCAAACTGGCTACGCGGGTTCGATTCCCGTCACC13.225806451612903No Hit
GCGTCGTGATGACCTCGACGAGCTTGAGGATCGGCGCGGGGTTGAAGAAG13.225806451612903No Hit
TCCCTCGCCCTACCAACGAGTGATGACTCTCCATCACGTCCGACGCGGCA13.225806451612903No Hit
GCCCACGGCACGGCCAGCCTGGAGGGCCAGGCGGCGGTGCGCGAGTGCGC13.225806451612903No Hit
CACGTGAACGACTGGGCCGGTGCGGGTGGGCGTGTCGTCGGCTCAGGCGT13.225806451612903No Hit
ACTCACCCGTGAGCATGGAGGCGTCGACCGCCGAGGTGCCGCTGACCACG13.225806451612903No Hit
ACGCCGTGCTGTGGGCGGCGATCTTCTACGACATGCGGGCCGTGCACGGT13.225806451612903No Hit
CTCCTGGCCCGTGCGGAGCAGCTCGGCGCTGCGCTCGTCGGCCTCGGCCA13.225806451612903No Hit
GTTGCCCGAGGCCTCGTGCTCCTCCGCCGCAGCTCCGTCCGCAGGTCTTG13.225806451612903No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)