FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003644748

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003644748
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences31
Sequences flagged as poor quality0
Sequence length140
%GC70

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTCGGACACCGAGACCCGCGACGGCACCACCCTGCCGGCCTACCGCGGC39.67741935483871No Hit
ACCCGGGCCTGCGGCTTGATGAGCTGGGCGGCGAAGATGCCCTGCACCGG26.451612903225806No Hit
TATGGTGGCTAATCGCCATCGGTGAAAGAAAGCCCGCTCCCTTCGGGTAA26.451612903225806No Hit
GCCCTCACCGTGGTGGCTGTGGGTCGCCCTGACGCCCCAGAGCCACCACA26.451612903225806No Hit
GGACTCCACGACGTCGGGGTAGAGGGTGCCCTGCACGAGCCAGCGGACGG26.451612903225806No Hit
GGCCAACGCCAAGCTGGACGACGACGGCACCTTCCTCGACGAGCGCGTCC13.225806451612903No Hit
GTCCAGAAGCCGCCTGGGTCGAGGGCGACCGTGTCACCGCCGACCCCGCG13.225806451612903No Hit
CGTGCGGCCGCCGCCGAGAGCGACCGCGAGGACGCCCGCGCGTCGATGGC13.225806451612903No Hit
ACGTCCAGCAACACCACCAAGAAGTGCACGATCGTGGGCAGCGGCTCCGC13.225806451612903No Hit
CAACCACTCCGTGCCCGGCGCGCTGAAGAACGCCGTCGACTGGCTCCACC13.225806451612903No Hit
CCTTGCGGACGACCCTCTCGGCGGGCAGCGGGAGGAGGCCGGACTCCGAG13.225806451612903No Hit
GGCCTCCCCGGTCGTGGTGTGGGGCGCGCTGCCGTTCCACCGCGCGGCCT13.225806451612903No Hit
GCGGAGTCCACGCTGGACCCGGCGCCCAGCTGGAGGACGGCCTCGACGGC13.225806451612903No Hit
TCTCTTAAGCAAGCGGAGGACAGTCTTTACGGCAAACATGCCAACGCCTT13.225806451612903No Hit
CCCAGCCCTCGCTGCTCATCCTCGACGAGGCCACCAGTTCGGTCGACACG13.225806451612903No Hit
GTTCCCCCTCTCTCCCTACGTGCTCGGTGTCTGGCTGGGGGATGGCGAGT13.225806451612903No Hit
GGTCACCATCACCACCGACCTCGCCGACCTCGCGCCCGCCGACCTCGTCG13.225806451612903No Hit
CGACCCCCTCCACCCGGAGGTCGTCGCCCCAGACCTTCTCGACCAGCTCG13.225806451612903No Hit
TCTCTTAAGCAAGCGGAGGACAGACTATACGGCAAACATGCCAACGCCTA13.225806451612903No Hit
AGCTGGCGGCGGTCGCGTACCGGCCCGGCGGTGACCTGCCGTCACCGTCC13.225806451612903No Hit
GGTAGGAGAGCAGCTCCAGGGCATCGGTGAGGTCGGTCGCGGCCTCGGCG13.225806451612903No Hit
CTGCACCGTCCGGCGGGAGGCGGCATCGAGTTCGGCGAGACCTCCGAGCA13.225806451612903No Hit
CNGACACACCTCTGACCTGCGCCGATGCCGGTGACAGACGTCATACCCCC13.225806451612903No Hit
GCGCCGACCCGGCCGGTGGCTTCAAGCTCACCGGCATCACCCTCACCGTG13.225806451612903No Hit
GGCCGGGCGGCCCGCGCAGCTGACACGCCCGCCCGGCACCGCGCTCCCCG13.225806451612903No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)