FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003644864

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003644864
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences20
Sequences flagged as poor quality0
Sequence length140
%GC61

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCTGTCACCGGTGGCCCGTTTGCGCTCTTGGAATACTGGATGAGCGGGA315.0No Hit
GCTCGACCTCATGTTCAATGTTGGGCGGAGCCGCCACTGAGCCGGTTCTC210.0No Hit
GGTCAAACTCACCCGTGGCAACCGGCCGTGGCCAACTGATTCCGCCGCAC210.0No Hit
TCGCGTGAATTCGCCCGTAGCCCCGGAGCGCGAGTATCCGGGCGGATCAG210.0No Hit
GGCCGAGTGTGGTGGTTGGTCACGCCCGTGCTACTGGCGCCTCGGCGTCC210.0No Hit
CTGGCCAAAGAACCGTCCGGGGCTCCCCACCTCACACCCTCGTCACTACG15.0No Hit
AGCGGGCTCTGATGCTTTGAACCTTGGCATCGCCTTGGCCAGAAGCTGGG15.0No Hit
GGGTAGATGTACGTGTTACGAACCATGAACTCCTTGAGGATGTCGTTCTG15.0No Hit
CCTGCTCGACATCGACGCCCATCGCCAAGATATAGCCCGCCTCGCCCAGA15.0No Hit
ATGGTCGTGCCGTCACGACAAACCCAGGTATTCGCCGCTCCCAACATGTC15.0No Hit
ACCACGGCAAGCCCGTGTCGAGCGACAAGGGCGAAGTCGACTCCGCGGTC15.0No Hit
CTGCACCAGATGCTGTCCGATGTGACCTTCGGCTTCATCTCGGGCACTTC15.0No Hit
ACGCCCCCACGGCGAAGAAGAAAGGCGCCGAGGGAGTCGGCCTGTTCCGC15.0No Hit
CCTGCACGACATCGACGCCCATCGCAAAGATATAGCCCGCCTCGCCCAGT15.0No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)