FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003644899

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003644899
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences19
Sequences flagged as poor quality0
Sequence length140
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCTCGCTCCGTGGCCTTAGCTGTGCTCGCGCTACTCTCTCTTTCTGGCC210.526315789473683No Hit
ACACTGAATTCACCCCCACTGAAAAAGATGAGTATGCCTGCCGTGTGAAC15.263157894736842No Hit
GGAGCTCTACGTACTACCTGCTGAGGTTCTTTGAACACAAACTCTCTGTC15.263157894736842No Hit
GTACATGGGAGAAGAGCTTAAGGCACTCGTGGAAGAGCTTGAAGCTGATC15.263157894736842No Hit
GTACCAGTGAGGAGCCAGCAGCAGGCGACAGCGACCCCTGGGCGGGCGCG15.263157894736842No Hit
GTCTTGGATTGCCAACACTAGCCCTCTTCCCTCCTTCAGCAGCAGCTTCA15.263157894736842No Hit
ACCTTTGCTGGGAAGAAAAGCAGAGGGCCTTTCCTGTCGCTTGCATCATC15.263157894736842No Hit
GGGTTTCAGGATTCAGAGGGGTCCTCCGCTCACGCAGCACCATGCAAATA15.263157894736842No Hit
GATCTCCAGTGGCTCGGCGTCTGCAGCCATCACGATGAACTCAGAGATGC15.263157894736842No Hit
CCATTGGGATGTCCTGATCCAACATCGAGGTCGTAAACCCTATTGTTGAT15.263157894736842No Hit
ATGTAACAGCAATCATACTTGTAGACAAACACATCCACTAGCTCTGCAAA15.263157894736842No Hit
AGGAGCACCTGGAGCGCATGAAGCGGCGCAGCAGCGCCAGTGTCAGCGAC15.263157894736842No Hit
GTATTGGAAATACGTATCTTCGGGGTTCTGCCTTAAATAAAATAGGGTCT15.263157894736842No Hit
TACTCACGTCATCCAGCAGAGAATGGAAAGTCAAATTTCCTGAATTGCTA15.263157894736842No Hit
TGTTAGCACAATGTGAGGAGGTAGAGAAACAGTCCACCTCTGTGTCTACC15.263157894736842No Hit
GCATGGGAACAGGGGTCACAGTGGACACGGGGGTGGGCTGGTCTCTCCAC15.263157894736842No Hit
GTTCTACCAGTGTCTGGAAACCTGTGTGATCGGCACAAGTACAGCTGCCC15.263157894736842No Hit
TAGTAGCCTAGAGCGCCAGGGGCGGAAATTCGCCTGAAAAGTTTTGCCGG15.263157894736842No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)