FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003645125

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003645125
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16
Sequences flagged as poor quality0
Sequence length140
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTGCCTCCCAGGTTCAAGTGATGCTCCTGCCTCAGCCTCCCAAGTAGCTG212.5No Hit
GTCCAGAGCTGAGGACTGCCTGTTTGCAGGGCCCGCCTGGCAGGACGACT212.5No Hit
TTCTAAGGGAATGCATAATTTCCAAGAAAAGTCATAGCGAACTGTGTCCA16.25No Hit
CCAATTAGGAGGGCACTGGCCCCCAACAGGCATCACCCCGCTAAATCCCC16.25No Hit
AGGCGCAAGAGGAAGATGAGGACGAAGAAGAGGCGCTGCCGCACTCCGAG16.25No Hit
ATGTTGACTTTGAGCTGTACAGACTCCACCTGGGTCCCGTTGAGCTCAGC16.25No Hit
GTGGGCTCCCTGCTGGCCACCTATGGCTGGTACATCGTCTTCAGCTGCAT16.25No Hit
GGATGTCGTGAAGCTGGGGGAGCTCGTCGCCGCCGCCGGCGGCTAGCGGG16.25No Hit
GGCAAAGGATTATAATGAATAAGCAATTTACCTAAGAGGAATCCCAAAGA16.25No Hit
AAGTATGCCCTGACAGGAGATGAAGTAAAGAAGATTTGCATGCAGCGGTT16.25No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTGGTTTATTGGA16.25No Hit
GCCCAGGCCTATGCCTCCACCGCCAAGTGCCTGAACATCTGGGCCCTGAT16.25No Hit
AAGTGGAGAAGGGATTGGCCTGGTCCCAACCATTACAGGGTGAAGATATA16.25No Hit
GTGCTGACTAAGGAGTCTGAAATGATGATTCATGTTTTACCTTTGGGGCT16.25No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)