FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003645126

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003645126
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16
Sequences flagged as poor quality0
Sequence length140
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTTCTGGAAGATGTTATTCTTGGGGAGCAATAGGTCCTCGAGTTTGGGGC212.5No Hit
GAGTATATATTTTTCAACCAGTATTTGAACAGTATGCCAAAGATCAGAAG212.5No Hit
GTGCGGAGAGAGGCTGCCTCCTGCAGCCCCCATAGCAGATTCTGAGAACA16.25No Hit
CTGAGAAGGTTGTTTTCGAGCAGACAAAGGTCATCGCAGATAACGTGAAG16.25No Hit
GCCCCTAGGAAAGGGAATACTCTCTATGTATATGGAGAAGACATGACACC16.25No Hit
ATATTAGTTGGCGGATGAAGCAGATAGTGAGGAAAGTTGAGCCAATAATG16.25No Hit
CTTTCTGTCCGATTTCCGTTTCAGGACAGATGAAGTGGAAGGCCCAGGAC16.25No Hit
CCACAGGCAGGTTGTGGGGCCGGCAGGCCTGCTGGGCTTCCTGGTGCTTC16.25No Hit
GACTAGGGCATTTGGACCTAGGGAGAGGTCAGTCTCAGGCCAAGTACATG16.25No Hit
GGGGGCAGGGGCAACAGCCCCAGCGTGCAGGGCCAGCATTGCACAGTGGA16.25No Hit
GTGTATATGTCCAGCATGTTGATTCTAACTGCTGAATAATACCTCATGAT16.25No Hit
CTATAATTCATGGAATTCAAAGTTCAAGCACACAGAACTGAAGGCATCTC16.25No Hit
CAACTTGTACTTGGCCTCCTCAGGTGTAATACGATGTACAGCAAAGCGAC16.25No Hit
GTAGCTGGGATTACAGGCACCTGCCACTGCGCCCAGCTAATTTTTGTATT16.25No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)