FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003645383

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003645383
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences25
Sequences flagged as poor quality0
Sequence length140
%GC58

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGATGGTAGTCGCCGTGCCTACCATGGTGACCACGGGTGACGGGGAATCA312.0No Hit
GGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGACATCTA312.0No Hit
GCCTGGACCCAGTGGCCAGCTGTCCTGGACAGTGACAGCCACAGAACCCT28.0No Hit
GGCAGCTATCTTTCTGCTGGTGAGAGGGCCGCAGAGGTAGACAAAGCCCT14.0No Hit
GGCTAGACTAGCGTACGAGCACTATGGTCAGTAATTCCTGGAGGAATAGG14.0No Hit
GTCAATCCTGTCCGTGTCCGGGCCGGGTGAGGTTTCCCGTGTTGAGTCAA14.0No Hit
GTCAATCCTTTCCGTGTCCGGGCCGGGTGAGGTTTCCCGTGTTGAGTCAA14.0No Hit
GGTATCAACGCAGAGTACATGGGGCTTTCCGGACCTGGCCGAGCAGGAGG14.0No Hit
TGCACAGGGTTGTCTCATTGAAGCGGAGCACGCATGAGTGCCCCCCGACC14.0No Hit
GTCCTAGGTTTAGCAATGAGCTGAGGAGAGGTGGGTAGAAGGATTGTTCT14.0No Hit
GTGTACTTCCTGGGCCGGCTGGTCCCTCGGGGGCGAGGGGCTGCGGAGGC14.0No Hit
GGGATCGGGGATTGCAATTATTCCCCATCACGAATGGGGTTCAACGGGTT14.0No Hit
GGTCCAGGCACGGTGGCTCACACCTGTAATCCCAGCACTTTGGGAGGCCG14.0No Hit
GGTATCAACGCAGAGTACATGGGCCTTGACCTCTGGCCCAAGATGGTGGC14.0No Hit
CCCCCTTGCCCGTTCTGTCCAGGCCGTAGGCGATGGCGGCGGCCGTGGGC14.0No Hit
CTTTCGAGGCCCTGTAATTGGAATGAGTCCACTTTAAATCCTTTAACGAG14.0No Hit
GGTCCTCGTTCAGGGCGATGTAATCCTTGCCGTCGTAGGCGTACTGGTTA14.0No Hit
CTGGGGGAGTGGGCCAAGCCTGAGAGAGGAGGGCCCTGCTCCAGAGATCC14.0No Hit
GAGATGGGGTGGTGGGTCACATGTGTCTTTGGGGGGTCCGCGCGCTGCAG14.0No Hit
GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCA14.0No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)