FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003645384

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003645384
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences25
Sequences flagged as poor quality0
Sequence length140
%GC55

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CAGACTTGCCCTCCAATGGATCCTCGTTAAAGGATTTAAAGTGGACTCAT312.0No Hit
GGAGTGGAGCCTGCGGCTTAATTTGACTCAACACGGGAAACCTCACCCGG312.0No Hit
GTCGTAGTTCCGACCATAAACGATGCCGACCGGCGATGCGGCGGCGTTAT28.0No Hit
GGCAAAGTCAGGCCTTTCTCTGTTAATCTCAGGTTTGCCTGATTAGCCTC28.0No Hit
GGCCAGGCCTGCCCGCACGATCGCCCGGATCACACCGCCGACCTCGGGCT14.0No Hit
CCTCCAGCCCTCGTGCCTAAGTGGCTTTCATTGTTTGCTAATTCCCTGTA14.0No Hit
GGATTGACAGATTGATAGCTCTTTCTCGATTCCGTGGGTGGTGGTGCATG14.0No Hit
GGGTCAAGTAATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGG14.0No Hit
GTTGTCAAAGTCCTCCCCACCCAGGTGGGTGTCCCCGGCCGTGGCCTTCA14.0No Hit
CCTCTCGGCCCTTGCGAGGACCGGAGAGCAGGACAGTGCCACAGCCCTTA14.0No Hit
GAGCATCGAGGGGGCGCCGAGAGGCAAGGGGCGGGGACGGGCGGTGGCTC14.0No Hit
ACACGGGAAACCTCACCCGGCCCGGACACGGACAGGATTGACAGATTGAT14.0No Hit
CAGAGCATCCTGGCCAGAACAAGCCAAGGAGCCAAGACGAGAGGGACACA14.0No Hit
GCCCTAACTGCGCAGTTAATAATTCTGGCAATTCGTCTCCACACTAGAAG14.0No Hit
GGTCTCACATCATCCAGGTGATGTATGGCTGCGACGTGGGGCCGGACGGG14.0No Hit
CAGCAGCGACCACAGCTCCGATGACCACAACTGCTAGGACAGCCAGGCCA14.0No Hit
GGCTTCAGGAATGGCTGGATCCAGGTATCATGTTGCTGACTGTCATGATT14.0No Hit
GGTCTGGGCTATTGGCTGGAGCCAGGACATGAGTCAGGGGCACCATGGAC14.0No Hit
ACCCTAGACTTAGCGTCAGAGGACCCATGGGGTAATCTTGTCTCTGCTAC14.0No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)