FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003645631

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003645631
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences47
Sequences flagged as poor quality0
Sequence length140
%GC58

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTACCAACCCTGACTGCCGATCAGAAAAAACAGTTTGGTCCTTTTGTCTC510.638297872340425No Hit
GCTAGCTGTGCCTTGCTTGTTGCATTGTTGATTTTGTTGATGACGATGGT24.25531914893617No Hit
GTTGGCGTACTTGCCGATGCCGACGTAGTCCAGCAGATCATGCGCCCAGT24.25531914893617No Hit
CTCGCTGGACATCAGCGCCAGGTGCAGCATGTCGCCGCGCGTCAGCGTCG24.25531914893617No Hit
GTGCTCGCATCCACGCTGCTGAAATGGCAAAACGTCAACAGGCCGAAGCG24.25531914893617No Hit
CCGTTGCCTCCAACGCCTCCACCGCGGCTGTGGCCTTCGGCTCCTGGTTG12.127659574468085No Hit
CGGATCAGATGATCGAACGCCGACAATGCGGCCTTCGCGCCATCGCCGGT12.127659574468085No Hit
AGCCGCCGCCGTCCATATTGTCGAAGTCGTAGTTGCTCAGCGACAGTTCG12.127659574468085No Hit
CTTTCGATAAGTCCATCGCATCTCGCGCCGTGGCCGCAGCCGGGATCGTC12.127659574468085No Hit
GGGCAAGCCAGGGTTCGACCTGTTCGACACGGAGGTCGACGGCCACCTGC12.127659574468085No Hit
ATACAGCACCGTTATACTGCCCACTCGTTTTCCGGCCCCTACCTCACGTC12.127659574468085No Hit
AATCAACGCGGATGGCCCAGCGACGCAGTGCTTTTCGCCCGCCTGTCGTT12.127659574468085No Hit
CGTGTCGGCCATGACCACTGTGTCGGCGGTGATCTTCCTCTACAGCCCGG12.127659574468085No Hit
GCTAAAGCCACCGAACCGTTGTTCAGGATGAAATACTTCGTTTTTGCTGG12.127659574468085No Hit
GTGTATCTCGATGGTTTTCAGTCCGTCGGAGAGGTCGAACACGCCCCGTC12.127659574468085No Hit
CTACCAACCCTGACTGCCGATCAGAAAAAACAGATAGGTCCTTTTGACTC12.127659574468085No Hit
CCCGCAGCGCCTGAGCCTCGGCCCCTCCACCATGCTCCTCGGACTCCTCG12.127659574468085No Hit
ATATTCGTTTCTCGTATGAGGACGGTTGGCTGCAGATCGAGGATACGGGC12.127659574468085No Hit
AAATTCGTTTCTCGTATGAGGACGGTTGGCTGCAGATCGAGGATACGGGC12.127659574468085No Hit
CACCTTTTCGATCTGCAGCGGCATGAAGCGGTTGTAGATGGCCGTGACAT12.127659574468085No Hit
GACCTGGCCAAACGCCTGGGCAGCGAAGCAGCGTGCTGCTGCTTCGCTGC12.127659574468085No Hit
CGTGTCGGCCATGACCACTGTGTCGGCGGTGATCTTCCTCTACAGACCGG12.127659574468085No Hit
GGCCGACGGTTTGGCCGCTTGCGTTGCTCGCTGAAGGAGGTCGGTCATGG12.127659574468085No Hit
GGTAGACGTACCTCCCGACTCAAATGGAGAAACATTAATGCGCGCAGTCT12.127659574468085No Hit
ATTTGCTTCAATGGGAGGACGCACCGATCGTCCGCCAGATTCTGCAGTTG12.127659574468085No Hit
CAGCAATATATGCGGCGCCGAGGGGAGCAGAGTTTAGAAAACGCGCGAGA12.127659574468085No Hit
ATGTCTTCCCGGGCGACGGGCGTCGGCAAGAATGCGCGAACGGAGCGGCG12.127659574468085No Hit
GTAATAGCGCAGTTCTTCGATCGATTCGATGATGTCTGCAAACGCCGTGT12.127659574468085No Hit
ATCCCGAGCTGCTCAGCATGCACAACGGCATCTACATGCCGATGATCCAG12.127659574468085No Hit
CTCTCTGTGCTCTGAGATTGTCCATGTAGCCCTGCAGAAAGTTCTCATCG12.127659574468085No Hit
GGCGTGATCGCGCGGCCCGATGCCGGCCCGTCGACCAAGCGGGTGCTGTT12.127659574468085No Hit
GCGCCCTGCCTGACCGTCTGCCATGGGTGAGTGGACACAGCCAGATCCGC12.127659574468085No Hit
GGAGTGGCGCATCTGCCGCGCCACCGGTGATGCACTCACCAAGCTGGCCG12.127659574468085No Hit
TATCAGCTCACTGCAACCTCTGCCTCCCTTGTTCAAGCGATTCTCCTGCC12.127659574468085No Hit
TTGTAAATCTTTGCCCGCAGATCCAGTGCTCATCCTTCAGTGCCTCGTTC12.127659574468085No Hit
ATAGCGACCAGGCAAGCGAGCCACCAGTTCTGCACCGCGGTGCTTTGTCA12.127659574468085No Hit
TACTTGGCTAGATTTTCCTTGGCAAAGCCAATCATTTCTTCATTACGATC12.127659574468085No Hit
GTAAATGGCGCTAGCCAGGACGGTTTCCTGCTGACGAGCCGGCCAACGCA12.127659574468085No Hit
AGCCTGAGGATGCCGTGCGCTTCGAATTCCTTCAAAACCTGATTCACGGT12.127659574468085No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)