FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003645789

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003645789
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences28
Sequences flagged as poor quality0
Sequence length140
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TCTTAATGCTTATGAACAACCAACAGTGGTCCCAAGGAGCTTTTTGATCT27.142857142857142No Hit
GTCTGTTTTACAGAGAGCTGATTGGTCCAGTTTGACAGGGTGTTGATTGG27.142857142857142No Hit
GGTGGGAAGGGAGATGGTGCAATGAAAATGATAGCATTCATGGGGAAAAT27.142857142857142No Hit
CATGGAATCATCACAGAATGGAATCGTACGGAATCATCATCGAATGGAAT27.142857142857142No Hit
GTTTTATTTCTTGTGTAGACATTTTTAGTTTGATGTAATCCCACTTGTGT27.142857142857142No Hit
GACCGGCCGCGCCGGGAACAAGGGCACCGCGGTGACGTTCGTCGATTGGG27.142857142857142No Hit
CGTGTTCACTTAGGGCGACTTTGCTCATTTGCATGTCCCCGCCCAGACAC27.142857142857142No Hit
GTCCCAGCTACCTTGGGAGGCTGAGGTGGGAGGATCACCTGCTTTTGGGA13.571428571428571No Hit
CTTCTGAGAGCCACGGTGACAGCTGATGCTTATCCTATTTGAGCCGAGAA13.571428571428571No Hit
GGTTGACGTAGAGGTCGAGCTCGAAGCGCATCTTGAGCAGCAGCCCGCGC13.571428571428571No Hit
GTCCCTGGGTTGCCCATTCTGGTCCAGTGGTTTTCAACCTTTTAGGGGCT13.571428571428571No Hit
TTGCCCGCACCGGTCATCTGGGTGGAGTTCTTCAGTTCGGTGAAGCCGTC13.571428571428571No Hit
GATTTTTTTCTTAAATGCTGGTTTTTCTGGTTTCAAATACCCTGCCACCA13.571428571428571No Hit
AACCTGCACGGTGCTGCCATGCGGGGCCGTTGCGCTGCACAGCTCGACGT13.571428571428571No Hit
GGCCACTACATATTCCTTTGTATTGCTTTTTAATTATTTTGTGGGTACAT13.571428571428571No Hit
GCCGAGATCACACCATTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCA13.571428571428571No Hit
TGATTGAAGTGAGGGTCAGGAACTTTTGTGGATGAGGCAGACTTTAGCCA13.571428571428571No Hit
GGCGTGGAGATCCGCTACTACTCGATCATCTACGACCTAGTGGACGACAT13.571428571428571No Hit
CCATCAGGCATGCCTCTCGCCTTTTTCTTCCATTACTCAAACCTCCTCTT13.571428571428571No Hit
GATTCAATTCCATTCCATTCCATTCCATTACATTCCATTTCATTCCAAAC13.571428571428571No Hit
GTTCAACACCTAAGATGACCTGGCTTTTCCCGTTGTCCGCCATCTTCTTT13.571428571428571No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)