FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003645790

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003645790
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences28
Sequences flagged as poor quality0
Sequence length140
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCCAACAGATTGAAAGGGGGACACAGGCATAATTTCTTATGAAAAACAC27.142857142857142No Hit
AGCTAAAGGATTGTAAACACACCAGTCAGCACCCTATGTCTAGCTCAGGG27.142857142857142No Hit
ACTCCATTCGATGATTCCATTTGATTCCATTCGATAATGATTACATCCGA27.142857142857142No Hit
CGCCGGACCTGCCGTCCCGGCTGCGGGAGTCCCGGCCGCCGCGGCTGCCG27.142857142857142No Hit
GACTTACTTGAATATGTGCATTCAGGATTTATTTTCCAAGTTATTGTTTT27.142857142857142No Hit
CTCCAGACGCGCTTCGCGCGTGGGACACGCTTAGCGTGTCCCTGCTGGAG27.142857142857142No Hit
ATATAAAAATCATCCCAAAATTGATTAAAACATAAGATCTGAAACCATGA27.142857142857142No Hit
AGCTGCGCAAGTTCGACGCGATCCTGCTCGGTGCGGTCGGCACGCCCGAC13.571428571428571No Hit
GCCTTGAGGAGGCCGCTTGCAGCGGCTTTGATGTCGTCCACTAGGTCGTA13.571428571428571No Hit
GAGGTCAGGAGTTCGAGACCAGCCTCGCCAACATGGCGAAACCCCATGTC13.571428571428571No Hit
CTTTAAAAGTTTCAAAAAAGGAGCATTCCTGTTATGAAAAAATATGAGGC13.571428571428571No Hit
ATTGATAATAGGGACAGACTCCTAGCCATACAGTCAGGTGGGTGAATATG13.571428571428571No Hit
CACATAAGCTATTAATGGAAGCACAGTTTTGTGATGAATTTAACTGTATT13.571428571428571No Hit
GTCCTTACGTAGGAGAGTATGTATAAAACATTTAGCCCAGCACCAAGTAC13.571428571428571No Hit
GGAATGGAATGGAATGGAATCAACCTGAGAGGAAAGGAATGGAATGGAAT13.571428571428571No Hit
TGTTGCAACTATTACTTCTCAGTAATTTGGCGATGATTCACTGATCTCAG13.571428571428571No Hit
AAATTAAATATGCATGTGTTTTGGTTTTATGGACTCTAAACTTGATTAAA13.571428571428571No Hit
GCCTCGGCCTCCCAAAGTTCTGGGATTACAGGCGTGAGCCACCATGCCCA13.571428571428571No Hit
CCCCGTCCGCGGGCTTCACCTACGCCATGGACCGGCGAGCAGCGCCGGGT13.571428571428571No Hit
CACCAGGTCTTCGCGCAGGAACGTGCTTTTGCCGGTGCGCCGGGGCGCCG13.571428571428571No Hit
CAGTGAAAGATTCAGCCCTGCCTCCTGCATTTATCACAGGTGTCAAGAGC13.571428571428571No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)