FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003645806

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003645806
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences27
Sequences flagged as poor quality0
Sequence length140
%GC66

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCCTGCTCCTGAGCTCCCTGGTGCTCAACTGGCTCGTCGGCCCGGCGCTC27.4074074074074066No Hit
CACGCGCGTGACGCGGTGCTGCGCCGCGTGGCGTGGAACGTCGCGACCGA27.4074074074074066No Hit
GGCAGGCGCTGGCGGAATTGGCGCAGGGACGAGCGCGCATGAAAGCCGTG27.4074074074074066No Hit
ACATACAGGTTCTGGTAGGTCGGTTCGATCGACTGCGACACGCCAGTGAT27.4074074074074066No Hit
CCTGGTGCACGTTCGTGGTCTCCCACTCGGCGGTCTGCGGGTCCGCGACG13.7037037037037033No Hit
GGTGAGCACGGGGTCCTCGCCGCCGGGTGCGGGGTCGCCGGTGGACGCCT13.7037037037037033No Hit
CAGCGCGGCCTCGTACTCCCGTTTGATCCGACCGGTGCGGTCTGCGACGT13.7037037037037033No Hit
GGACTGCAATAAGGAAGATTCATATATCACCCTCGCCTTGACATTCTTGA13.7037037037037033No Hit
CTACCGTTCCTGCTCAACCACCTCGTGTACGGGATGAACCTGCAAGAAGC13.7037037037037033No Hit
CGGTCGAGCAGCGCCCGGCCGACGGCGTCGTGGACCTGGCGGCCGGCCGG13.7037037037037033No Hit
AACCTCCCACTTCTCAACACCCAACTTTCAAAGAAACGAGGGAAAAAAGG13.7037037037037033No Hit
CACCTGCAGTACGCGGCGCTCGACCCCGACCGGCCCGCCTCCCTGAGCCC13.7037037037037033No Hit
GCGACGAGCGCTTCGTGCGCATCAGCGAGGACCTCAAGCCGTTCGTCTCC13.7037037037037033No Hit
ATTGAGAGATGAAGGGAAAGAGAAACGAAGTGACCAAGAGACAGAAAGAG13.7037037037037033No Hit
GGAGGAGACACCATGACCGCACAGATCCTGGACGGGACGGCCACCGCCGC13.7037037037037033No Hit
GCAGGATGCCATCCGCGCCCAGGTTGAGCAGACCAGCCTGCAGCGCGAGC13.7037037037037033No Hit
GTACAACCCTGAAAGCGTTGGTTCATGAGAAATTTGGCGATGGCATTATT13.7037037037037033No Hit
AGCTCGAGCGCACCATCGCCGAGCTCTGGTCCGGAGTGCTCGGCGTCGCG13.7037037037037033No Hit
TGTTGGACCCGCGCAGGTTCCCGTCGCGGTAGCGGGGAAAGCGCAGCACT13.7037037037037033No Hit
CCGCAGGTGGTGGCCGAGGCGACGGGGAGGGTAGCCGTGGTGCTGGACGA13.7037037037037033No Hit
CTCCCGGCACCAGGCGATCGCCTCGCTCAGCGAGCGCGCCGTGGCCTCGT13.7037037037037033No Hit
GCGCACACCGAGCGGCTCGTGGGCGGGGACCCGTCCGGGCTCGTCGCGCA13.7037037037037033No Hit
GTCCACGAGCACCTGGTCACGAGCTCCTGCAGCCACGGTCGTCTCCGTTG13.7037037037037033No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)