FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003645807

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003645807
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21
Sequences flagged as poor quality0
Sequence length140
%GC58

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTTGATGGCAGGCGCTTCTTCCCATTTCTGGAAGTCTGACTGCAATGCGA29.523809523809524No Hit
CGGTACAGCCGCCGCCAGACCCAGTGGTTGAGCGCCATCACGAAGATACA14.761904761904762No Hit
ATTCCCTTGTTCTCACAGGCCTTCACAGACCTTGTGACTCCTCGTGTCCT14.761904761904762No Hit
GCGCAGCGGAAGGCGCCGGTCTGGGTCACCAGTTCCTGTGGCACCTGCAA14.761904761904762No Hit
CCCTGGAAGTACTCATTAATAATGAGACCATCGGAACCCGGTCGGATGTT14.761904761904762No Hit
GCCAGGAAGATCGGGATCTGCACCGCCAGCGGCAGCGGCAGCGCATGCCA14.761904761904762No Hit
GCTCCCTGGAGCTCAATCTCTCCAAGGCGATTGCAACCGGATGGCAGCCG14.761904761904762No Hit
ATACGTCGCTTCGGAGGCTACGTGCGGAAACAGCAGTTCAGGATGGGAAT14.761904761904762No Hit
GTGCTGCACCGCATAACTGTGCGCTTTGGCGGGCGTTGGTATGGTCCTCG14.761904761904762No Hit
GTCTTTGCGCGAGTCGACCGCCGAGCCCGAGCGCCCCGCCCGCGCCGCAT14.761904761904762No Hit
GGACAAGGTCAGACAGGCGAGGGCGCGGCGCTGCCCTGGCGGCGATAAGC14.761904761904762No Hit
CCGCGCGGGCGTGGGTTCTGGTGTGACGCTTGCCAACCCGGCAGTGACAC14.761904761904762No Hit
ATCTGCCTGTTTATACTTACTAAGGCTTGAAAACTACTGTCTCAAAGGGA14.761904761904762No Hit
GAATTCGGCCGACCAATCGGCATAGCGCGTGGCATTGAGCGCCGCCAACG14.761904761904762No Hit
CTATTAGCACAATTAATTGCCCTTTCTTCTCAAGTAGCCTTCTGAGGAGT14.761904761904762No Hit
CTGTGGCACGTGTCTTCATCAAGTCCGGCAAGGGCGACATCATCGTCAAC14.761904761904762No Hit
GGTAGCCGATGAGGCCGTTCATGTGGCCGTACTCGGCCCGATAGATCAGG14.761904761904762No Hit
TCCCACCACGCCTGCCCCTTGGCCACCTGCTCGACGATGCCCAGGTCGAT14.761904761904762No Hit
CGGCGTCATTGCGCGTACTGCGCGAGACCGTTTCCGAACGACCAGTTCTC14.761904761904762No Hit
AGCCTACCTGGAGCTGGTCGACAGAATTGGCGACCTCGAAGGCGAGAAAG14.761904761904762No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)