FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003645808

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003645808
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21
Sequences flagged as poor quality0
Sequence length140
%GC58

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATCTCGCGTCGACAAGCTCGGCTTCTCTTTGATGGCCAATCCTTGCAAT29.523809523809524No Hit
CTGTATATAATGAATAAATAAATAAAATCTTAAAAAAAAAAAAGTACTGT14.761904761904762No Hit
ATTTAAGATGCTTTCAGAGGAAATGTCAATGTGGATAGCGCAGTGGGAAG14.761904761904762No Hit
GATCACCGCCAACAACACGCGCAACCTTGAGCAGAAGCAGGCGCTCTATC14.761904761904762No Hit
CTCATCACTTACCGCACGCGTAGCGCACTGCGTGACGTCGGTCGCGCGTT14.761904761904762No Hit
GACTACGACACGCCGCCGCGCACCAAGACCCACACGCTGCCCGATTTCAT14.761904761904762No Hit
GTTCTGGTCGGCGCACCGCTCGCATTTCTACCAGCGCGCCACCGACAACG14.761904761904762No Hit
CGCCTCGCGTTCGTCCTCGGGCACCATGTCGAGCTTGTTAAGCACGAGCC14.761904761904762No Hit
GTGTGGTTTTTTGCTGAAGCAGCAGGAAGCGGATTAACGCTTCGAGAACT14.761904761904762No Hit
GCCCGTCCTGATCCGGATGATCACGGCCGAGCCAGTCATCATGGCGGACG14.761904761904762No Hit
CGCGAGGACCATACCAACGCCCGCCAAAGCGCACAGTTATGCGGTGCAGC14.761904761904762No Hit
ACGGCATAGTACAGTTGATGCTCATAATGAAGAATCCTACATCACTGGGA14.761904761904762No Hit
CTATAAATGTTGTATTATCGAATCATGAAAGAGGATCAAGCCATTTCCGC14.761904761904762No Hit
CTGTTGTTCAACGTGGTGGCGGGCGCCTCCACCATCCCGACCGAGCTGCG14.761904761904762No Hit
GTCGAAGGCAGCCAGGTCTCGACCGGTTCAGTGCTCAAGTGGTTCAAGGA14.761904761904762No Hit
CGACATCCTGGCCTGGCATGCGCTGCCGCTGCCGCTGGCGGTGCAGATCC14.761904761904762No Hit
CCCAGCAACTCTGGCACCTTGGTGTCAGTACCCTTTGCAGCAGCGAATGA14.761904761904762No Hit
GTTCAAATCTTTGGCAGCCTTGGCATAGTCGATCGTGCCCTTGACCATGG14.761904761904762No Hit
CGCTGCAACCGTTTGCCCGGGACGCGGCAAGCGGGGCGTGCGGATCACGA14.761904761904762No Hit
ACCGAATACTTCCGCACGCCCGATTACGAAGTGCATGTCGCCGGCATCAC14.761904761904762No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)