FastQCFastQC Report
Tue 10 May 2022
EGAF00003645823

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003645823
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences721071
Sequences flagged as poor quality0
Sequence length140
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTCCCACTTGGATAACTGTGGTAATTCTAGAGCTAATACATGCCGACGGG8000.11094607881886803No Hit
GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCA7910.10969793543215578No Hit
GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA7860.10900452243953786No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)