FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003645897

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003645897
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences99
Sequences flagged as poor quality0
Sequence length140
%GC60

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TCACCGGTCTGCGGGTCCGGGACGGTGTTCGCGCCCGCGCCGTCCTTGGG22.0202020202020203No Hit
AGGGTGGACGCTCGTACCTCCGCGGAGACGCCCTCAGCACGAAGAACTGG22.0202020202020203No Hit
GAACCTGCTCTTCCCAGGCCTGACGCGTAAACATACCCGGGACGACTTCG22.0202020202020203No Hit
GTTGGTAAAGTCCGGATATTGCTGCAGGTGGCGCTGTCTCTTATACACAT22.0202020202020203No Hit
CTTCTCATAGTTCGTTGTTACTACTAAGTCGCCTATGAGACCTCCTCGGG22.0202020202020203No Hit
GGCAGCGAAATCTGCACCGGCAGTTCAAACAGGCGCATCACCATCATCGG22.0202020202020203No Hit
CCCTCCATTCCCCGACCGTTGCCGCTTGCGTAGTCCGCACCCCAGCGAAA22.0202020202020203No Hit
CAGCCCACACTGCCCATGGCTGATACTGTGGACCCCCTGGACTGGCTTTT22.0202020202020203No Hit
CACTCATCATGGCGCACCCTGATTAGCCAGCACCAGGGAGTCCAATCGAT22.0202020202020203No Hit
GTTTTGCAGACCACGATGATGAGATTCGCGTTCTGTCCGTTGGTGATGAA22.0202020202020203No Hit
TGTCTATCTCGTCTTTTCCTCGTTGAATCCCCTCTTCCTGTCTCTTATAC22.0202020202020203No Hit
GTGGGCGAACAACCCCGGCCGCGCCCGAGGATTGCCGCGAATGGCTCCCT11.0101010101010102No Hit
CCATCGGCTCCAGCAGCGGCCAGGCCCGGTGTCCCGGCTGTCTCTTATAC11.0101010101010102No Hit
CACAGGCCCCTCACACCGCATACGCTGTAACTACGAACGGCGGTCAGCCA11.0101010101010102No Hit
ACGTCAATACGCCCCTCTCTTGCCGTACCGCCAAAAAGATTATCGAGAAC11.0101010101010102No Hit
CTGACCATCGACCACGTGCTGACCAGCCCGCGGCAGCGGGCGCGGCGCAC11.0101010101010102No Hit
GCTCAGGCTCTCGGCAACGCGACGGAACTCCTCCAGCATCGCGTCCATGT11.0101010101010102No Hit
GTACCCACCCAGAGGGTGCCATCGGGCAACGTCGCCAGGAACGGGATCGA11.0101010101010102No Hit
GCCCGGCGCGCCGCCCTCGCGAGGTTGTCTGCGAGCATCGGTGCGCCCAG11.0101010101010102No Hit
CTTCCTCAGCCGGCTTCTCGACCACGGCGCTCTCCGTGGTGAGCACGAGC11.0101010101010102No Hit
CCCCAACGCCGCGTGCGTGCGTACTATTCCCGCGCGCACCGCGAGGTTAA11.0101010101010102No Hit
CCGCGGACGCACTCCAGCCAGAAAAAGCGCCTCGTCGGCGTAGATGTTGC11.0101010101010102No Hit
GGCCCTGGACACCGGCGCGGCGGCGACCCAATGGCGGCCACGCCGGCCGG11.0101010101010102No Hit
CAGCTCACACAGCAGCTGCTCCACGGGGTTGCGCGCGGCACGCCCATGCC11.0101010101010102No Hit
ACCTCCAACAACGCCCAGGCCAACTCTGGCGGCGATGGAGGTGACTCTAG11.0101010101010102No Hit
CCTTCATAAGTTTTAGATGCGTTTGTAACTGCTTTTTTAGCTTGTTTCTC11.0101010101010102No Hit
GGCGAAAGCCGGCAAATCGGTGATCCTTCTGGAAGCCGGAATCCGCATCC11.0101010101010102No Hit
CAAGATGCACAGCGAATGGTTCGAGGTCAGCGCCAACACGGTGGCGGCCA11.0101010101010102No Hit
GGGATTTGGTGAGTCCTTTTTCGAAATCTAAACGCAGTCGACGATCAATT11.0101010101010102No Hit
GGCATTGGCATGACCGTCTGCCCGGATTACGCCCCTCGCGCCGACGCCTC11.0101010101010102No Hit
GTCCTCGGCTTTCTGTCGCTGTCTCGAGGTGCGCACGTCGCGGGCTCGCC11.0101010101010102No Hit
GTCCCAACGCCCGCACCTGCCCGGCCCAGTTGCGCGAGCGGGTCTTCTAC11.0101010101010102No Hit
CGCCTGGCCGAGGTCGCCCGCGGCGGGGCGGTGCGGGCCCGGGGGCCGGA11.0101010101010102No Hit
TTGCGACTGTCGTGCCGGTGCCGGTGGACGCCGTGGCCACCGACCGGGCG11.0101010101010102No Hit
CCACCCTGCAGCATAACATTTTCGCACAGCAACAAAATGCAAGGCCGTGG11.0101010101010102No Hit
ACTAAGGGGCGGAAACCCCCTAACACTTAGCACTCATCGTTTACGGCGTG11.0101010101010102No Hit
ATGCAATGGAATGGATTCAACTTGAATGGAATGGAAAGAATGGAATCAAC11.0101010101010102No Hit
CGCCGGTATGGTTGAAGACCAGATCGAGAATGACGCCGATGCCTTGCGCA11.0101010101010102No Hit
GGGAAAAGTCGAGTCGTAGGGCAGCAACTCGGCCCCGGTGGCCGTGACCC11.0101010101010102No Hit
GCATCAGGGAGACCTCGTGGCGGCTGCTGAGCTGACTGATCCCGACGACG11.0101010101010102No Hit
GGTCGGATAGCGGACCTCGATCTTGGTGCTGTCTCTTATACACATCTCCG11.0101010101010102No Hit
CCCCGCAGGCGGCGGGTGGCGGCTCGGCGCGTCCGAGCCCGGTCTATTAT11.0101010101010102No Hit
GTGTCAACACATCACTTGGCTTCACGGGTGCTACGTTTGAGGACGAAGAT11.0101010101010102No Hit
ATCAGCATCTGCGTCTGCATCTGAGTCTGCGTCTGAATCAGCATCTGCGT11.0101010101010102No Hit
ACCTTGACGCCGCGTGCGGCGACGACCTCTTCCGCCTCAATGACTGTCTC11.0101010101010102No Hit
ATATTGTGGCGACAGACGTGGCGCATTCATAAACTGATCGATACTGGCGC11.0101010101010102No Hit
CTGCAGTACCGCCTGCAAATTTTCCGCTTTCGCGCAGCCCCGCAACGCGG11.0101010101010102No Hit
GCGTCACCGAGGTTGCCAAGCGGCGTGCCCACAAGCACGAGTGCAGCTCG11.0101010101010102No Hit
TCTACCTCGTCAGCCCCGATGGCCAGCTGCTCTCCGGTGACGTCAACGCC11.0101010101010102No Hit
CCCCGCAGGCGGCGGGTGGCGGCTCGGCGCGTCCGAGCCCTGTCTCTTAT11.0101010101010102No Hit
CCTATGGTGATGTTCTCGGCTAACCAGAACCCGGATGGCCGACGCAAGGA11.0101010101010102No Hit
GTGAAGAAGTACATGTAACTATCACTGATCATGATGACTTTAGCATTGAT11.0101010101010102No Hit
CTTGAAAGCGGTGTCATCGGCCCGGAGACCATGGCCGCGCTCGGCGGATT11.0101010101010102No Hit
GAAGGAGACCGTCAGTGAAGCAACGACTACTTGACCGCATGTTCCTGCCC11.0101010101010102No Hit
ACTTCGGCAAGGGCTCGGTGATGCGCCTCGGCCAGGAGACGCGGGCGCCC11.0101010101010102No Hit
CGGCTGTGGCGGGAGGGCGACCGCAAGGCCGCCAACGCGGCGATCCCGGA11.0101010101010102No Hit
CTCCTCGACTTCCTCCTCTTCCTCCTCTTCCTCTTCGGATGCGCCGTCGT11.0101010101010102No Hit
CCACGGAAAACGCGGGCACTCCCGCCTCCGCGGCGGTCGACGGCGACAAC11.0101010101010102No Hit
GCAGCAATCATCCGCGTAATTTGTTTGTCTGGCGCTCTAACCTGCTTGGC11.0101010101010102No Hit
GGGGTAAGCCACCACGCCCAGCCAAGGATGGCACTTTCACAGACACAATA11.0101010101010102No Hit
GTGTTGGCCGGTCAGTCGGCGAACTACGGAGCCGCCCCCGACCAGGTCAC11.0101010101010102No Hit
GATGTGCCAGGACCGCCGCCGCCATGACCCTGTCTCTTATACACATCTCC11.0101010101010102No Hit
ATTGGGTACAGCTCACGAAATATGTAAACTATATCGATACGATGATTGAG11.0101010101010102No Hit
TTCCAGATGATTCGTCTAGTCTGTTCTTTTGTAACTCCGTATAGAGTGTC11.0101010101010102No Hit
GTGAACGTACAGTGACTGCGCGTTATCACACCAGAGGCAGACTTCTGAAC11.0101010101010102No Hit
GGCCCGCCATCGCTTCCCCGCTCTTGCCAAGCCTGCGGGACGATGGCGGC11.0101010101010102No Hit
ATGTAGTACTGCCCCAGAAACGCCGCCATCACCTCCTGTCTCTTATACAC11.0101010101010102No Hit
TGCTGCTGGTGCTGCTGGTGCTGGTGCTGTTGCTGTCTCTTATACACATC11.0101010101010102No Hit
GATCGTCATCGACTCGGTGGCCGCGCTTGTGCCCCGCGCCGAGATCGAGG11.0101010101010102No Hit
CCGCCAGTTCGATGATCAGGCCGAAAAGTTCAGGCAATGTCAGGCCGAGG11.0101010101010102No Hit
ACCACCACACTCACCGTCCTGGCGGTCTCGGCCCTCGCCCTCGCGGGGCT11.0101010101010102No Hit
GGGACAGCGCGGCCCGCGGCAGCGCGGAGATCTCCACCGGGTCCAGAGTC11.0101010101010102No Hit
CAGGTGGGCCGCGCGAACGGGCTGATCATGCTCGCGCAGGCGATCGGCAA11.0101010101010102No Hit
TGCCCGGCGCGACCCGGTTACCTCCGCGATCTTTGCTGCCGGCGCGTTTT11.0101010101010102No Hit
ACACGAAACTCGACTTTAATTCAGTATCAACGTCAGTAACAAAACGGCTT11.0101010101010102No Hit
GTGGTGGCCGCCGCGGCCGAGGTCGAGGCCGCGGCGGCCCTGTCTCTTAT11.0101010101010102No Hit
TCCGACTGCTGCGGGCGCTGACCGCGCAGCCGCGGGCCACCGCCGTGGCG11.0101010101010102No Hit
CCGTAAGGCTGGCGACCTGATTTCCGGTGGCGCGGTTGCGATTGCCGACA11.0101010101010102No Hit
TCGTTGGTGACCGCGACGACGTCGTCGGTGTGTGCCGAGATCGCGGCGCA11.0101010101010102No Hit
CTGGCAAGATTGCCGATATCAAGAACCAGCGGATCCTGCAGAAGCGTATC11.0101010101010102No Hit
TCAGCGCGGTGTTCGTTTCATTCAAGTCCCGACGACGTTACTGTCGCAGG11.0101010101010102No Hit
CACGTGCCCGGCTCCGGCTCGCGCGCCTGATCGTCGAGCACGGCTGGCCA11.0101010101010102No Hit
GCGGTGCGGGCCGCTGGGCTTCGCTTCCACAGCACGATGACGGCGATAAG11.0101010101010102No Hit
GTGCCTGACCAAGAACCTGGTTCGTCTTGTGTGCTCCACCGTGTACGAGG11.0101010101010102No Hit
ACACAGGGGGACCTGATCCCGACGGGCCGCCCGCACTCATAAGAAAGGAG11.0101010101010102No Hit
GTGCCGGTGGAGCCGCCCAGCGTGCCGGCCGGCAGCTTCTCGACCAGCAC11.0101010101010102No Hit
CCCTAACGAAGGGATGACAATTAACCCCACCAGTGAAAGCCAGAAAAAGC11.0101010101010102No Hit
CCTCTACGCCCTGGAAAATGAATGCCCAACTAGAAGACCTGTCTCTTATA11.0101010101010102No Hit

[FAIL]Adapter Content

Adapter graph