FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003646067

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003646067
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences29
Sequences flagged as poor quality0
Sequence length140
%GC57

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGCCTTTACTGCCGTGCTCGGCATCGGCGGCCAGGAATACAGCGTGGCCT26.896551724137931No Hit
GCACCGAGGTGTGGTCGAACGTCTGCGAGTTGACCCAGCCGCCACGGCTC26.896551724137931No Hit
CTTCACTGCATCCACGATCTCGGCCATCGTCACGCCGGCCTGATCCACCA26.896551724137931No Hit
GCTTGGATTTCATCCTGCATCAACCAACGGCACATTGGCATTGATGCAAC13.4482758620689653No Hit
GAGCAAGATGAACTTCGGCTCGGGCGGCGGCGCAAAGGCCAAGGCGTGGA13.4482758620689653No Hit
GCCTTAGGATAGCAAAGTCTCTGATGGTTGCTGTTGGGCTGATGATGTGT13.4482758620689653No Hit
ATTCTCATGAACAGACCGCTGCGTCAGACCGCTGCAACCCTGGCTTGCCT13.4482758620689653No Hit
AATATGCACAAAGACTTTTAAAAATTAATCCAGATGATGCTGAAGCGAAT13.4482758620689653No Hit
AATATGCACAAAGACTTTTAAAAATTAATCCAGATGATGCTGAATCGAAT13.4482758620689653No Hit
GGGGCTCCGCAGAGCGATGGCGTGAGCCAGCGCCAGAACACCTTTTCCAT13.4482758620689653No Hit
CGACACCGACCGTGCGGTTCTGGAACTGGTCGATGTACGAACTGTCTCTT13.4482758620689653No Hit
CTCTTAGGCAAGATGACTCTTTTTTTTGGACCGCCATCAGGCGTATGCTT13.4482758620689653No Hit
TGGTTGGCCCGACCAACAATGGCAAGTCGATGATCGTCGAGAAGTTCCGC13.4482758620689653No Hit
GGAGCGTCGGCTGCGTGTAAAAGTTCGCAATTTGAAGAGGAGACGTTTCC13.4482758620689653No Hit
CTTTGGTATAGATTTCAACATTGGCCATAATTTAGCTCCTGTTTTTTTAC13.4482758620689653No Hit
GGCCTGCACCTCGGCATCGGTCACGCGGTGGGCGCCGTGCAGGATCTGCG13.4482758620689653No Hit
GGGCTATCTGGAGATATTTTTATGGCAGGTCATAGTAAATGGGCCAACAC13.4482758620689653No Hit
GGCCCGGGTCACGCTCGCCTGCACGAAGGGGCGCACGAAGATGTCGTAGA13.4482758620689653No Hit
GTGCCAACCTCGACAACCGTTCTTTCCGCCTGAACTTCGAACTGATGATC13.4482758620689653No Hit
GCGTGATGCCGACGTCTTCCACGGTGTGGTGATCGTCGATATGGGTGTCG13.4482758620689653No Hit
TGTTTATCGTCTTATCGAATCATTTGATGAGGATGACGATTTCCTTTCTC13.4482758620689653No Hit
CCACCGACAGGCCAATGAAGAAGGTCGCGCTGGTGCCCATCACCTTGCGC13.4482758620689653No Hit
CCGTCCAGCAACGGCTGAATTTGTTCAGCGCCGCGAATCCTGCGCCATGA13.4482758620689653No Hit
ACGAAGCACAGCCATCATCGCGTGCAGCTTTTGAAGAGGCTTCGTATCCC13.4482758620689653No Hit
ATCCGGGCGTCGTCATCCGGCGTTGATCCTGGTCAGCTTCCCGGCGAGGG13.4482758620689653No Hit
GCGATCAGCGCGATCTCCACCCCACCGCGATCGCATTCGTCCTGCAGCAT13.4482758620689653No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)