FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003646068

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003646068
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences29
Sequences flagged as poor quality0
Sequence length140
%GC58

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCCCGCGTGTGCCGATGTACATCGTCTCGCCGTGGAGCCGTGGCGGCTGG26.896551724137931No Hit
GAGCTAGCCGAAGGTTTTGGCCAGCAACAGCCCGATGATGGCCAGGACAG26.896551724137931No Hit
TCATCGGCGTGATCGAGAGCATCGCCTTCCAGACCAACATCCTGGCGCTG26.896551724137931No Hit
CTATGACTTCCCGGCCGAGCACTGGCAACACGTAAGGACCACCAATCCGA13.4482758620689653No Hit
CCTCGAAAGTGAAGGTGATTACTCGTGGTGAAGCTACGCGTCTGATCAAC13.4482758620689653No Hit
AAAATTGGTTTCAGCCGGATCGTGCTCGTAGGTATGGATTTGAAACGAAA13.4482758620689653No Hit
GCTCGATCTGGCCGCCGCTGTGTATGAAGCTGTCCTGAAGGATGCTCCGC13.4482758620689653No Hit
GTGGAGACGCTGGGACTCGCCTACGGGTTCGAGATGATGCGGCTCGAGCG13.4482758620689653No Hit
GGGATGCGCAGTTCGTTGCCGAGGAAGCGCAGCAGGTTGAGGAATTCCCG13.4482758620689653No Hit
CGTTGCGCGGCTGGGAGGCGACGTCCTTGTCCAGCTCTGTCAGCGCCTCG13.4482758620689653No Hit
GGGCCACCCAATCCTGACCCGCATGACCTGTGCATAGCAGGGGCAGCTGG13.4482758620689653No Hit
TTTATGAAATGGTCATCGAGGATGTGGCCGGCGAAGGCCATTCCAAGCAT13.4482758620689653No Hit
TCTCTCGGCCAACCCGCATTTCGCCAAATCGGCGCTCGGGCGCTATACTG13.4482758620689653No Hit
GTCTTCAATTGAATCAAGTCGTTGAGAACGTCTATGCTCCTGGTTCCAAA13.4482758620689653No Hit
ACTGGCAAAAGTATGAGAAATTTGCGGTTCGAACTGCCAACGCCAACGTA13.4482758620689653No Hit
GGCCTCTGCCGTCGCATAGGCGGTCGCCAATTCAGCCGCGTACGCGATCT13.4482758620689653No Hit
CCTGCTGCCCTACCAGCAGTCCGCCAAGACCTGCGGCATGCACTACCTGC13.4482758620689653No Hit
TCCCCTTCCTGGACCACATGCTCGACCAGATCGCCCGACATGGCATGGTC13.4482758620689653No Hit
CGGTGTGGGTCGGCAAGTTCCTGGGCGAATCGGCGCTGACCGCGGTGGCC13.4482758620689653No Hit
TTTTTTAGAGTTTGAATCGCATTCTTCTTTTGTTCCATTGCAATATAGTT13.4482758620689653No Hit
GTTTTGTTTTGGCCGTCGAGCCATCCTCCAAACACATCGTTTGCGTGCAT13.4482758620689653No Hit
TGATTGCCGTGCCGCCAGGACCGTAACCTTCGTAGATGATGGTTTCCATG13.4482758620689653No Hit
GTGTCTACAGGATGGGCGCGAACAGCTTGGCCACGTGCATGATCACGCGG13.4482758620689653No Hit
TTCGTACATCGACCAGTTCCAGAACCGCACGGTCGGTGTCGCTGTCTCTT13.4482758620689653No Hit
ACTATCGGCCGCGGTGCGCAGCGCTTCGATGTTGTTCAGGCGCCGGCGTG13.4482758620689653No Hit
TTTTTTAGAGTTTGAATAGCATTCTTCTTTTGTTCCATTGCAATATAGTT13.4482758620689653No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)