FastQCFastQC Report
Tue 10 May 2022
EGAF00003646185

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003646185
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences514431
Sequences flagged as poor quality0
Sequence length140
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTCCCACTTGGATAACTGTGGTAATTCTAGAGCTAATACATGCCGACGGG6300.12246540352350462No Hit
GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTA5340.10380400870087533No Hit
GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCA5180.10069377623043711No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)