FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003646381

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003646381
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences27
Sequences flagged as poor quality0
Sequence length140
%GC61

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACTTTGAGCTTTTTCGCCCGGTAATAGCGGTTGCCCTGCGCGTCGGTGCC27.4074074074074066No Hit
CTTCAAGGGCGTCGGGATTTTCGCCGCCACGCCTTACCTTTGCCAGTATC27.4074074074074066No Hit
GCGCGCTGGACGGTCCCGTTCACGATCACGACCCTGCTTGCGGGGACGAT27.4074074074074066No Hit
GTCTTGTCATCTGCCATGACTCCAGCGTGCGTGGCCGCATCGGCCTGCAA27.4074074074074066No Hit
AGGGAGCATGATGCTCTAGCTGTAAAGATGACAGCAAGACTGCCTGTCTC27.4074074074074066No Hit
GTTGATCGCCTTCGCGGCGTTCTGCAGCTGATTGAGTTCCGAGGCATCAG13.7037037037037033No Hit
CGTCAGCACGGCCTCGTCGGCGCGCAGGCTGCGGGCCGTGAGGATGCGCA13.7037037037037033No Hit
CAGCGCCGCCATCGCGCCGGCCGATCCCGACCCCACCACGACGACATCGA13.7037037037037033No Hit
GGATACACCCATTTCTCGATGGGAACGGCCGGGTCGCGCGCTTGATGTCG13.7037037037037033No Hit
CTTGCTCCACAGGCGCGAAAGCGGCTGGACGCAGAAGTCGAAGCTCGCCA13.7037037037037033No Hit
GTTCATGGACAGTGGCATTGTTTTTCTCCTCGCCATCGTCATAGACCTGT13.7037037037037033No Hit
ACCTGATCCTCAATGCCGAACGCCCGGGCTTGGTCGCGCGTCAACTGCTG13.7037037037037033No Hit
GCGCGAAGAAGCTCGCTTCCTCGCCTTCGAGGAATTCCTCGATCACCGCC13.7037037037037033No Hit
GCCCGAAAGAGCGAGCGGCGAACTCTACGCTGACTTCGTGCTGCCCGCCG13.7037037037037033No Hit
CCGACAGTTGGGCTCAGGCCTGGGCTCCAGCCACTCCATTACACCACTCC13.7037037037037033No Hit
GTGTGATAGCCTTCTGTATATTATATAAAAGTTTGGGTATACCTGTCTCT13.7037037037037033No Hit
CCGACTGTTGGGCTCAGGCCTGGGCTCCTGCCACTCCATGACACCACTCC13.7037037037037033No Hit
GGCCTCTCCTCGATGACGCTCGCGGATCGCGCCACCATCGGCAACATGGC13.7037037037037033No Hit
GTCATGCACGGCATCCGCTTCACCGGCATGCCGGCTTGGCAAACCCAGCA13.7037037037037033No Hit
GCCGACCGCTCGGGGGTCGCGTAACTAGTTAGCATGCCAGAGTCTCGTTC13.7037037037037033No Hit
GCTCCGCGCCGAGCTCCTGTTTCGGCTCGAGGACCTGCGCTGTCTCTTAT13.7037037037037033No Hit
GTACGGGATGTAGCGGGTGGACTGCTCCAGATAGGCGGCGAGGCGCCCGC13.7037037037037033No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)