FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003646382

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003646382
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences27
Sequences flagged as poor quality0
Sequence length140
%GC62

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCTCCGGAGGCGGCCATGGCGGCGGACGCCTATCGGCTGATCTCCGGTC27.4074074074074066No Hit
CGGACGGCATCGTTCTGGATGAAGAACACGGTGCTGTCGCTCGACATCAT27.4074074074074066No Hit
GATAGACCTTTTGGTGGGCGACGTTCGCCTTGTCGTCGATGCCGCTGCCG27.4074074074074066No Hit
CCTTCAGGACGGGGTCGAGTCCTTCCTGACTGACGGTCCCGGCAAGGCCA27.4074074074074066No Hit
GCAGTCTTGCTGTCATCTTTACAGCTAGAGCATCATGCTCCCTCTGTCTC27.4074074074074066No Hit
TCGTAGTTCCGACCATAAACGATGCCGACCGGCGATGCGGCGGCGTTATT13.7037037037037033No Hit
GGCCCGCTGAGCCAGGGAATCCGGGCGATGTCGGCGCACCAGTCCGTACG13.7037037037037033No Hit
CGCAGGTCCTCGAGCCGAAACAGGAGCTCGGCGCGGAGCCTGTCTCTTAT13.7037037037037033No Hit
CCGACCAGTGGCCGCAGAAGCTGATCATGCAGCTGATCCCTCAGCAGCTA13.7037037037037033No Hit
CCGACCCGAGGCCGCACAAGCATAAAAATCAGATGATCCATCATCACATA13.7037037037037033No Hit
GATGCGTGCAGGATATTGAGACCTTCGATGTCGTCGTGGTGGGGTCGGGA13.7037037037037033No Hit
CCGCGGCACTGGCGCACTGGATCGACACCGGGGTGCTATTGGGGGCCGTG13.7037037037037033No Hit
GTCCTGCAGCGCGGGCGCCTCGCCGCCTATCTGGAGCAGTCCACCCGCTA13.7037037037037033No Hit
CTTCGGCCCTGCCATCGAGGCGACAACCTCGCCGAGATCGAGTTCGAGCA13.7037037037037033No Hit
GTCTATGACGATGGCGAGGAGAAAAACAATGCCACTGTCCATGAACCTGT13.7037037037037033No Hit
GCTCCTCGTCGCGCGCCAACCCGCGCGCCACGGACCATAGACTGGTGCCT13.7037037037037033No Hit
TTCGATCCCCGTCGTCATCAAGGCCGACGGGCTCGCCGCCGGCAAGGGTG13.7037037037037033No Hit
GTGATCAGCTTTGGCGTCTGGGGGATCTCCTCGCAAAGCCTTCTGGGCGG13.7037037037037033No Hit
GCCATCGGCGCCGTGGCAGGCAGTGCAGCGCTCAAGGGCTCGGTTGAAAT13.7037037037037033No Hit
ATCCGAATGCGGCCTCGATCGACGGCAAGTCGTGGCACCCCCGCGCCGTG13.7037037037037033No Hit
CCTCATGCGCGGCGGCGTGCGGAATGAGATGCGTGAAGCCCTCGAAGGCC13.7037037037037033No Hit
GTATACCCAAACTTTTATATAATATACAGAAGGCTATCACACCTGTCTCT13.7037037037037033No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)