FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003646448

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003646448
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences58
Sequences flagged as poor quality0
Sequence length140
%GC61

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGCGAATCCACCGATGAACAGCAGCGCGGCGGACAACAGCCGGTTCGTGC58.620689655172415No Hit
TGCTATGCAATGCGCGACCCGACATCGGAATGGCCCGCGCATCACCACGC35.172413793103448No Hit
GAATATAATGAAAGGGACGAGAGGTCACTTCCATGATTAGATTATACATG23.4482758620689653No Hit
ATTTAGAGGCGTGCCGCGCGTGCGCATCAATGCATGGAAGAGTGCGCGGC23.4482758620689653No Hit
GATACCAACGCCAGGATCACGCCGAAAGCGATCCGCTTCTCTCCGGCGCT23.4482758620689653No Hit
CTGGTACACGCCGCGCGAGATGTACGAGCTGGTCACCCAGGTGGAGCGCT23.4482758620689653No Hit
CATTCGATTCCATTCGAATCCATTCCATTCCAGTCCATTCCATTCGATTC23.4482758620689653No Hit
GTCAGTCTACCTTTCTCATTGAGAAGACCGCTCGAGATACAGTCCACTGG23.4482758620689653No Hit
AGCACACCCGATGTTGCTGACCACCCCAGCCCGGCTGGACGCTGACCCGT23.4482758620689653No Hit
CACCAGCACCGGCACGCAGGCGGCCAACGGCGTCGTCGGCGAACTGCACG23.4482758620689653No Hit
GTTCCTACATGCTGGACGCACCGATCTGCCGATGATCTTTGATGTCGAGA23.4482758620689653No Hit
CCGCTGCAGCACGCCCACCCGGACGTGCTCAAGCGCATGAAGCGCCCCGC11.7241379310344827No Hit
GCTCTGGACCTGGGGCGGCCCATCGGGCCGCCCTTTTTCTTGGTTCATCG11.7241379310344827No Hit
GTCGGATTGGCGGACACGAACTAGACCAGCACCCGATTTCCCGCGCCCGA11.7241379310344827No Hit
GGAGTCAGGACGCGGCGGCGGCCGCGGGAGCGCGGCGCAGACGCGCGAAA11.7241379310344827No Hit
GCAGATTCCCTGCATCGAGCGCAACGCGATCGCGTCGGTCAAGGCCATCA11.7241379310344827No Hit
AGGTTGGAATCGGCGTGCCCTCAAAATATTTGACCTTGCCCGTGCCTTCG11.7241379310344827No Hit
GGCCATGGATATAAAAACGGCCAAGCAAATGCACCGCTGAAGGTTACACT11.7241379310344827No Hit
TCGGTCGGGATCGCCCCCAGGCCACCGGCCTGCAGCATCTGGGCGCATTG11.7241379310344827No Hit
CCGCTACTCGGGCGACGTGGCCAAGGCCATCGCGGCCGGCGCGGACACGG11.7241379310344827No Hit
GATTGGATGAGAAAGAAGGAAACCGATGTCGAAAAAGCGATTAAAATACC11.7241379310344827No Hit
CGGCCGCACTTGCCCTGTCACTTGTCGCCAGCACCTTCTTCGAACAGCGC11.7241379310344827No Hit
GGCTTGCCCTCGTTGCCCGAGATGTACGGGCTCCACTGCTTGGCGCGGAT11.7241379310344827No Hit
GTCCAGAAAGGGTGGTCGGCGGGCAGCGGCTCGGTGCGGAATACGTCGAG11.7241379310344827No Hit
GGTAAGTGACGCATGGAACAAGGTGCCCGAGATTGCACTGTCGTTTTGGA11.7241379310344827No Hit
CTCTCTAAAGAGGTAAGAATGATCATTTTTGCTTATTGATTGACTGAGAG11.7241379310344827No Hit
ACACCTGCGTCGACGTGCTGCTGCCCCTCGGCATGCCGCTGAACTCCAAC11.7241379310344827No Hit
GTTACCAGCCCGGTATGCACCACCCGGACCCTTATGCCGGCGACAAGCTT11.7241379310344827No Hit
GTCGGATTGGCGGACACGAACTCGACCAGCACCCGATTTCCCGCGCCCGA11.7241379310344827No Hit
CCGCCATGGCCGGCTGCACGGGCAGGCCGCGCCGGAAGTCGCCCAGCGGC11.7241379310344827No Hit
TCGGGGCGCGCCGTCCGCGCCCTGCCCGGCCAGATGCTGCTGCTGGCCGG11.7241379310344827No Hit
CTTAATCCAGCCGCAGCATCCTGTTCTGCGAGACGAGGATGACCCGGTCG11.7241379310344827No Hit
GGAGATGATGCAAATGATGATGGACGATCAGGGCACGGGAATGGGCATGG11.7241379310344827No Hit
GCGATGGCCTTGTGCCAGCCGCGCAGGCGCTGGCGCGCGAGGCGCTTCAG11.7241379310344827No Hit
GTGTTGCTGCCCCGGCCGGTCTGGTAGGCCTCGAAGTGGGCCAGCGACGT11.7241379310344827No Hit
GGATTCAGGACGCGGCGGCGGCCGCGGGAGCGCGGCGCAGGCGCGCGAAA11.7241379310344827No Hit
TCCTGGTCCTGACGACATTGTGCTCGACGCCGAGGACCGCAGTCGACTTG11.7241379310344827No Hit
GGATTCCACCGCAAAAAGTCCTCGCATACCGTATTGAAACCCTTGCTCTC11.7241379310344827No Hit
CCTTCTAACAGTCACCCTCTTCTTCTACAGGTCTGCTGGAGTTTGCTGGA11.7241379310344827No Hit
GCCTGCGGGCGGCGTACTCCGCTCCGTGCGTCAACACGAATGTCTTGAAG11.7241379310344827No Hit
GTGCTGGTGCGCAGCGGTCAGCCGGGGTTGCGCGGGCTGGAGGCCTCGCT11.7241379310344827No Hit
CTTCCGCGTCAGCTGCGCCTGCCTCTCCCAGGCCTCCCGCCAGGGCGGTG11.7241379310344827No Hit
GACGAGGGCGCCGAGGTCGAAGCGGCGCGCATCTCGCGCCATTAGCCACA11.7241379310344827No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)