FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003646498

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003646498
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences19
Sequences flagged as poor quality0
Sequence length146
%GC60

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCGTATCAGACCATGCAGCCAGGCCCGGACGGGAAACCTACGGTTGTGGA210.526315789473683No Hit
GCGTATGAATACGTATAAGCACTGCCTGCCACCGGAATCATAGAAGCGAA210.526315789473683No Hit
GCCCTGTGAGATTAAATAATGGCGCATGAGTCAAGCCCCAGACATTGTAA210.526315789473683No Hit
GCCGAGCATGTCGCCGGGAGCCACGAGCAGGACCGCCAGTCCCTGCGCTG15.263157894736842No Hit
TGTCACGATCAGTGCTTGGGGCAATCGAGCGTTGTCGTAGGCGAGCGCCG15.263157894736842No Hit
GGTGAACGAGCCGTCGGTCTCCTTGCGCCAGTGCTCGACGCCGACACGAG15.263157894736842No Hit
AGACGAGGTCGATCGCCGCGTCGGTGGCCTTCTCGACGGCCGCGTCGCCG15.263157894736842No Hit
GGCTGCGCTTCGTCAACACCTCCCGCACCCACCTGGCCCGCGAGATGCGC15.263157894736842No Hit
CGTGTCTCAGTTGGATTTGGTGTTCTGCGCCGTGAACATGAAGAAGGAGG15.263157894736842No Hit
GTCGTAAGAGAAGGTGCGCCCCTCCCGGCCAGCAAACAGCTGGGAGCCGT15.263157894736842No Hit
TTTGCCGCGGGCGCGTCCGGCGCTTTTAAAACCTGCAAGTTGTCGGTGTA15.263157894736842No Hit
ATCTGGACGGGGAGAGCGCCAAGGGACTGGAGCTGCTCACCGGCCAGACG15.263157894736842No Hit
GGGCACACGTCTGGCGCCGGCGGCGCGATCGGCACGAGGTGTGGAGCGAT15.263157894736842No Hit
GTGGTGCTGCCGTCCTCCAGCGCGTAAGCCGTGATGACGGGCACCTTTTC15.263157894736842No Hit
TTTCCGTCCCGCGGGACCTGACGCGGGTTAAATCCAAAATCCTGTTCGGC15.263157894736842No Hit
GTAAAGTAATTGAAAAGGCAAGCGGCCTGCCCTGGGAAACATTTATCCGC15.263157894736842No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)