FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003646939

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003646939
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16
Sequences flagged as poor quality0
Sequence length146
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[WARN]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCAAAAGCTCGCCGCTGGGCCTCTCGCACCGCCGCCGCCGCATTCACCTT318.75No Hit
ATCAAGCATACCGGGATTTGTTAGTCATCAGTGAATTGTACCGGCAACAA212.5No Hit
TCCATCAATAGACCACGCAGACAAAGCAGAATTATCCGCATCATTCACGG212.5No Hit
CAAAGTCCTGAAGCCTGATCTGAAAGAGCTGGTGACAGATTTATCATTTA16.25No Hit
CATTTCAGCTGGGGCTAGAGAGAGACGGTGGCGGTGGAGGCAGCAGAAAG16.25No Hit
CCTCAGTTTTGTGAATCACCGCCATGTGGTGCCTTTGGAGTCAGCCAGCT16.25No Hit
TGTGTACAGATCACATGGCAAGAGAGAAAGCAAGAGAGGGAGAAGGTGTC16.25No Hit
CCCGGTGCTATCGCGAGCAGGAATGGGCGACGTCACCCACGTTGTCGATT16.25No Hit
CACAAAAGGCAGTTGCCAGAAGTCACAAACGTCCCTCAAGCCCCCTTTCA16.25No Hit
CTTNTGCTTCCTTGGTTGCTCAGGGCCTTGGTTCTCTGGCTTTGTTGCTT16.25No Hit
GAGTAGCTCATTAGAATAAAAGATGCTTCTATCGCCTTCATCACTCAGGA16.25No Hit
GGTGTGTCTTCATCAAGCGTTGCCTCTCTTCCTTCACAAAGCTCCCAAGC16.25No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)