FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003646941

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003646941
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11
Sequences flagged as poor quality0
Sequence length146
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTCCATAGGACAGCCAAGAAACTGCGAGTCAGCTTGCTTTCTCACCTGGG218.181818181818183No Hit
CAAAGTCCTGAAGCCTGATCTGAAAGAGCTGGTGACAGATTTATCATTTA19.090909090909092No Hit
CGTCTAGTGAATTATAGATGTCGAGCAGACGGGCTTTTAGCCTAGTGTGA19.090909090909092No Hit
GTATGTGGTCTTCCGCGCGCGTCACTTGGGTACGGCGAAAATCCTCGATG19.090909090909092No Hit
CCTTCACTGCAGTTAGTTGATGAAAAAAAAGGTCTGGTTCCTTACCAATT19.090909090909092No Hit
ATTATCAGCCGGCCGACCAGCTGACCCAGGCCGAGATTCTGACTGAAATC19.090909090909092No Hit
GTCGGAGGCCTCCGCGATGTCAAGGCAATCCAGCACCGCCCGTGGGGTCT19.090909090909092No Hit
ATCCACAATCAGCAGGTCACCACAGAAGATCCCTGCTCCGATCATCGAGT19.090909090909092No Hit
ATTCTTTGCATCTCAGGTTTAGCAACAAGAGTGGACTTGAAGCCAAGACC19.090909090909092No Hit
GTTCGGGCAGCACTACCCGCAAAATCCCTGCCATAACCACCGATGCCGCA19.090909090909092No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)