FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003647098

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003647098
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9
Sequences flagged as poor quality0
Sequence length146
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTATATGTCACGATAAAAACAATATCGCTAATCGGATGGAAAATGACAGC222.22222222222222No Hit
GCTGTAAGTTTATGTACTCACTAGTAGACTGGAGAACTTATTGTGTTCCC111.11111111111111No Hit
AGGGAGTACCAGCAGGCGATCGCCAGCGTCGAGTCAAAGCAGCGATCGAA111.11111111111111No Hit
CCGCGGCGTCGATGGCATGATCGAGCAGTGAAGCGGCCAGCGCACCGCCG111.11111111111111No Hit
GGCCATGATCATGGGTACCGGTGGCACCCCGGTCATGCCGACCTCGTAGA111.11111111111111No Hit
CGTATACGTGCGCATGCGTACGCGGCACGTAGCAGCAAACAGATAAAAAT111.11111111111111No Hit
CTCTTATCATGGGAATTCTTTTCGAAAAGACTCAAAATCGTTGCATTTTA111.11111111111111No Hit
GTTTCACATTCCGCTACACCTAAAATAAACTTTGTGGTAACTTGCGTTGT111.11111111111111No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)