FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003647099

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003647099
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences32
Sequences flagged as poor quality0
Sequence length146
%GC53

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCGCTTTCATCAGAGGTTATAGCCGTCTTCACATCATCATCTTTTGT39.375No Hit
CACTCACGCAGCGAGATACGTCTGGGGGATTGAGCGCTCCCGCACAAGCA39.375No Hit
TCGATACGGCGCTCGAGGTCATCGCGAATCAGGTCCATGCGTTCTTTTCC26.25No Hit
CGCTAGCACCTTGTGTGCCGGGGCAGGCATTGACGAAGCGGTGTCCTCGG26.25No Hit
ATACCGCGCAGCGCATTGCGCTTGTCCTCGGACAGCTCATGCCAGGTGTC26.25No Hit
GGAATATAGCCTGCGGCTGCACGAGCAGACAACGAACGGGTACTGATTTC13.125No Hit
CCCCACGTCCATGCAGACGTCGAGCACGGGCTTCTCGCTGTTGGTGAGCA13.125No Hit
GTTATAGCCTGTGTACTTGCGGCGGAGCGACTCGTCTTGGATGTCGAGAT13.125No Hit
CATGGGTTGATCGACCGGCCTACAGAAGACGTAGCCCGTTCACTGTCCAA13.125No Hit
AAATAATACTGTCCGATTTCTGTATTAAAGATGTGAGTGTGGTGGACGGA13.125No Hit
GCTGGAACCAGTCAAAGCGATGGTACGCATGCCACGTTCTCGTTCAGTCG13.125No Hit
GGCCAAGGAGTACCTCAAGAGGCGTATCTACCAGGACAAGGATCTGCCCG13.125No Hit
CCACCACCCATTTCTAGAATTCTTTTCATCTTGCAAAACTGAAACTCTAT13.125No Hit
GTATAAACCTGCGTTTGTCTCAACGTTTCTTAGTCATAGCTGCACTAACT13.125No Hit
GGAATATAGCCTGCGGCTGCACGAGCAGACAACGAACGGGTACTGATGTC13.125No Hit
CTGTCACGGCTAGGCCGTGATCAGAACATTCGAGTTAACCACTCAACGGG13.125No Hit
GTGCTGGTAATCGGCGACGGTCAGTTGCGCGGCGACTTCATCAACCAGGG13.125No Hit
GCTGGAACCAGTCAAAGCGAGGGTACGCATGCCACGTTCTCGTTCAGTCG13.125No Hit
AGCCCAAGCTGCCGCCAATGAATATGGCGAATAGAATCCACATGATACCG13.125No Hit
GCCACTACGTTCGTTATGGGGCAAGTACGCTGCCATAATTCGATGCATAT13.125No Hit
TTGTCTATGCCGCTCGATCACATAGACTTAGTGGCTGCAAATGACTCAGT13.125No Hit
CCGCATGACCTTCTTCAAGGACGTCATGGTGCTCAGCGGAAGTGGCGTCG13.125No Hit
GTGCGTGTGAGTCAGGAAGGCAAACCGTCGGAAACACGCTTTAAAGTGGA13.125No Hit
ACTGCACGATCAAAACTCGGTGAGAATTATCTTGACTAATTCCCCGCCCA13.125No Hit
GTGGTGTCAGACGCCCCCCGCCCTAGGGTGGTGACGTCCTTAGTTGTTTG13.125No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)