FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003647100

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003647100
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences32
Sequences flagged as poor quality0
Sequence length146
%GC52

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CAATTCTAGTCAAATCTAACATTGGTGTGAGGAAGAACCGATCTAATGCT39.375No Hit
GATCTGTTCTTTCATCCGACTGAACAAAGTCCAATCGTCTAAGTTCTTTA39.375No Hit
CTCATGAGCCCCCTCTCATGAGCCCCCTCGCGCGGCAGAATAAACACCAT26.25No Hit
AACTACTACCAATGCGCTTGCAGCCAAATCAGTTGCAGAAATCGGCGCCT26.25No Hit
AGGTAACTCCGGGCGCTCTGTTTATCGCTCTTCCCGGCACCCGGGTAGAC26.25No Hit
ATGTTTTGCAATGATTTTTGCATTTTCTAGTTCGGATAATCCTCTCGCAA13.125No Hit
ACCGGACAGGACGTGTGAGGAGAGCAGCGCTGGTTACTCACTCGAAGTGG13.125No Hit
TCGCCGGATCGCTGTGTGCAGGCAAGCGAGCCGCCGCTGTCATGAGCCTG13.125No Hit
CATCTGGGTTAATCTTCTGGCATTTTTAGGCGTTTTGCTAGTAAGTATTA13.125No Hit
TTTTATTCGCGGCACGTTTCAATCTTGTACTCTAGGCTACAGCATAGCAG13.125No Hit
GGCGATTTAATCCCGTGCCTGCTTCAGTGAGCTGCCTGTCAAATTCACGG13.125No Hit
AGGTTGTTCTATACGAGGAATCCTTGCGGCGTCAGGACCTCGACGACGCT13.125No Hit
GCGTGAGGAAGCCGCCCTCGGTCTGCCAGCTGAAAAACAGCCAGATCACC13.125No Hit
CCTGAAAACAGCTACTACACCACTTATTGAAAGTTATAATGACGAACAAT13.125No Hit
CCACTGACGACCTGATGGACCTCGCCTTGGAGGTTTCCCCACAGCCCGCT13.125No Hit
CAAGCCGATCATGGAATCGCTGCTGGAGGCGCGCGGCCTGCGGCGGGTGG13.125No Hit
CTCCACAACTACTTGATATTGCCGATTTACACTCGGAAATGCAACCCCAT13.125No Hit
ATAACTTAAAATCTGTAAAACTTAAAAGTGCTACGCTAGACAACCGAGTT13.125No Hit
GAACGGATCGGGGACGGTCTCGCCAGCCTTGTCGCGGTCGCCGAAGTAGA13.125No Hit
TCGCCGGATCGCTGTGTGCAGGCCAGCGAGCCGCCGCTGTCATGAGCCTG13.125No Hit
GGGGGGGGGGGGTCTGGGGGATGTGCGGTAACGCTGGCAGTGGCAGCGTG13.125No Hit
ACCTTCTCCAGAGGCATATGCGGCTACCTTGGTTTTTTTCCCTGTAGTAA13.125No Hit
CTACCCGACGATCAAGAATGCCGTGCTGCCAGCAGAAGGGAATGGAAGCT13.125No Hit
GGGGGGATGCAGTCTGGGGCATGGTCGGTAACGCTGGCAGTGGCACCCTG13.125No Hit
TGTTCAGCCTTTAAAAGGAAGAAAATTCAGACACATGCTGCAAATGGATG13.125No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)