FastQCFastQC Report
Fri 10 May 2024
EGAF00003647119

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003647119
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8
Total Bases1.1 kbp
Sequences flagged as poor quality0
Sequence length146
%GC61

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTAAAAAATGGTCTGCTTGTGCTGACTGGAGGGCCAGGAACTGGAAAGAC225.0No Hit
ACCAACAGCGAAGGCGGCAGCGCTTCCGCCTCGCGCAGCATCTGGGCACT225.0No Hit
ATGTCGGTGCTCGGTCCGATCCGTGGCCTGGTGCCACAATACAGAGTAGG112.5No Hit
CCCTCCATTTGCCCGTTGCCTTGGAGTCGCCCTCCTCTTTGTGCTAGCCT112.5No Hit
CAATTGAAGGGACTGGATGCGATGGTCGCGTCGCTACAGGCGGGGCTGGG112.5No Hit
GGTGAACAGCAAATCGTCACGCAGCACGTCGGCGCGTGCGGACTCGGCCT112.5No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)