FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003647195

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003647195
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13
Sequences flagged as poor quality0
Sequence length146
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTCTTACTCCTGTAATTCTTTCAATGCCGGATTTTTCCCCTTTGAACTT215.384615384615385No Hit
ATCAGCAGGTTGAGGAACACCTGCGCCGAGAAGAAGCCGTCGTAGAACAC215.384615384615385No Hit
GGGGCAGACCGGCCGGCACGAGCCGCCGTTCGACCCCGACCCCGACGACT17.6923076923076925No Hit
TAGTAGCGTTTGCCCGGATAACCTTCAGCATATTTGTTGGTCAGCTGAGA17.6923076923076925No Hit
GGTTTCACTAGTGGCTTCTCTCAAGAGCATAAGTATTCTACGATGGGTGA17.6923076923076925No Hit
TCCTTGGTCTCCAGACAGTATTCTACAAGGAAACCCAAACTGGCCCATAA17.6923076923076925No Hit
GAATCGATTGGCTATGTCTTTCAAAATCTTATTTAAAGCATGTCCAACAT17.6923076923076925No Hit
ATCCACAACGAAGCGGCGTAACATCACAAGTAATTCAGTAATCAATTCAG17.6923076923076925No Hit
GCGTGAAATCTGGGACGGCTTCCGCTTCGGCCCCGAAGCAGCGAAGGACG17.6923076923076925No Hit
GGTTTCAATTTCTATCGCCTATACCTTCTGCATAATGAATTAACTAGAAA17.6923076923076925No Hit
GGAAGATTCCATTCCATTGCATTCCATTCCATTCCATTCCATTGCCCTGC17.6923076923076925No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)