FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003647219

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003647219
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences35
Sequences flagged as poor quality0
Sequence length146
%GC52

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTCCGGGGTGGGGCTGGCTGTCCCAGGGCTCACCGCCATTCATGAAGTG38.571428571428571No Hit
TTTGATGAGACAGGGCTGAATACTTTAGTTTTCCTCCTGGAAATCATCTG25.714285714285714No Hit
GAGTTGAGCAGAAGGACTATGAAGCCTCTGCTGCAGTGTGAAGGAGCTCA25.714285714285714No Hit
GTAATAAGGGCACTGAGGATTATTCTCCTTCAAGCTACTGACCTGGTAAC25.714285714285714No Hit
GGTAAACGGCGGGAGTAACTATGACTCTCTTAAGGTAGCCAAATGCCTCG25.714285714285714No Hit
GTAGATAATCAGAAGTATTTCACGTGGTCATCTTAGGAGAATCCTAGTTG12.857142857142857No Hit
TCCTTGGGTAGCCAAGACCAAGCCTTGCGCGCCGTGGAGATGCACTTCCC12.857142857142857No Hit
CAGACGTGTTTTGCGTGCCACCAGGCGCGCGTGAAGAACCACGACTGTCT12.857142857142857No Hit
GGCCAGCCGGTCGGTCAACGCGGGCGGCGGATTGTCGGCGACGAAATGGC12.857142857142857No Hit
AAGTGGGACGTGGGATTGGATATGTTTTTCACCAAAAAAATTTAAAACAC12.857142857142857No Hit
TAGCAATAAAGCCCCTCTGCCATGTGTTTTTTTTCACCTTAACTATGTTA12.857142857142857No Hit
CGTTAAAGAAATGACAGAGTGTATAATGTGAATTAAAAGTTTAAAAAGAC12.857142857142857No Hit
GGCGCATGCCACCACGCCCAGCTAATTTTTGTATTTTTAGTAGAGACGGG12.857142857142857No Hit
GGCTGAGGCAGGAGAATTGCTTGAACCTGGGAGTTGGAGGTTGCAGTGAG12.857142857142857No Hit
CCTTTAACCAGAGCTTACAAACTGTAGGGGAAAGATTATCCTTTTGCCCT12.857142857142857No Hit
GATCATGCCACTGTACTCCAGCCTGGGCAACAGTCTCGCTCTGTGGCACA12.857142857142857No Hit
GTATGAAAAAATGAATGTACAGTAGAATTAAAAAGAGTGAAAAAGAATAC12.857142857142857No Hit
CGTCTGGCTGCTGCACACCCTGGGCGCCGAGGTGACGCTGGTGGCTCCGC12.857142857142857No Hit
GGCAGAGGGTCTCCTCACTTCTCAGACGGGGCGGCCGGGCAGAGACGCTC12.857142857142857No Hit
ATCCCCATCACATTTGTTGGGGACTCCCTGCATTACTGGCCCTGAATAAC12.857142857142857No Hit
GGGCCACGGCTACGAGGTCGCCGCCGTGTCCGGCAACAACAGGTGCAAAG12.857142857142857No Hit
GTACAGCGCCGCCATCCGGACCGAAACGCCGTTTCGCACTTGTTCGAGCA12.857142857142857No Hit
GACCTGCAAAGGCTTCACGTGTAACCAGTCCAGTTACACCCATTCGGTAT12.857142857142857No Hit
GGCTTGGTGACATAGTCCACCGCACCCAGGCTCAAACCCAGTTCCTCATC12.857142857142857No Hit
CGTCTATGCCTCGAATCCGTCGGGATGGCTGGTGATCCAGCGTCCACTGG12.857142857142857No Hit
CCTGTGCTGGTGGGTGGTCTTATGCGACAAGCAAGGTTAACAACGCCTTC12.857142857142857No Hit
GCGGACAACCTGCTCGACATGTACAAAAAATCGCGCAGCGAAGGCTTTGG12.857142857142857No Hit
CGTCTGAAGGGGCACCTGTTTAAGCTTGACTGTCAGCAGAGTCAAATCCA12.857142857142857No Hit
CACACACACAGAGAGAGAACGAGCTCAGTGAATTGTCCAGGTGACACACT12.857142857142857No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)