FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003647221

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003647221
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences29
Sequences flagged as poor quality0
Sequence length146
%GC52

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTTGGTTATCGGCTAATGCCTTGGATGGACAAAGTCTCCATTGGCAAAAC310.344827586206897No Hit
TCCCGATACACCGAGAACAGGGTGTTCGCCGGCGTGGACAGGTCACAGAA310.344827586206897No Hit
ACGATCTCCTGACCTCATGATCCATCCATCTCGGCCTCCCAAAGTGCTGG26.896551724137931No Hit
CTTTGTAGGAATGGAAGCCATTGGCGAGTCTTGGGCATAAAAAGTGATGT13.4482758620689653No Hit
GATTGCTACATGGACCCCCTGAGACTATCATTATTACCTCCTAGGGCCAG13.4482758620689653No Hit
GTGCGCCTACGGACTCAGGGCGCTGTGGCGCTCGCGGCAGCCGGCGACGC13.4482758620689653No Hit
GAAATGTTGTTTAGAGTGTATAGCAATTATGTGCCTGATTTATTACGTAA13.4482758620689653No Hit
CTGCTGGAGACCGGCCTGCCGGGCCTGCCCGTGACAGATGAGCAGGGCCT13.4482758620689653No Hit
TTGTAGAACATTTGCAAGTTCGTCGCAACTGCTGGGATCATTTAAGCATG13.4482758620689653No Hit
CCCAAACCCACTTTCTCAGCCGCCCCGTGTTTTTTTTCCTTCCACACATG13.4482758620689653No Hit
GCTAGGCCTACACAGGGTCAAGATTATCAATATTACTGTCTTCCACCTGT13.4482758620689653No Hit
CACCTGCGAAAGGCTTGCCCCATGACCCACAGCGTCTTCATCGATGGCGA13.4482758620689653No Hit
GGAATGGAATGGAATGGAATGGAATGGAATGGAGTGTAATGGAATCAACT13.4482758620689653No Hit
TTTTGATTACTGGCGGCGCCGAGACTATTTGCCATGGTGTGGTACAGGTT13.4482758620689653No Hit
CCACTGCACAGAGCCCTATTTACTTACTTTCTTTTTTTGGCAGTGGGATG13.4482758620689653No Hit
GTACTTGACGTTACTCACCATCAACATACCTGCCAATGCTACCAAGATAG13.4482758620689653No Hit
CCTGATAGCTCACGGTGTACTGCAGTACGTCTCAGTGGACAATCCGGACG13.4482758620689653No Hit
GCCTATTTGTGCAGTTTCCAGTTGGAGATTTCAATCGCTTTGAGACCAAA13.4482758620689653No Hit
GTCAAGTACTATAGCTTTAAAGATTTAGATCTGAAGGGGCGCGTACCCTT13.4482758620689653No Hit
ATTTTATTCTTTCCCAACAGGATCCATTTGGAAAATATCTAGCGGTTAGT13.4482758620689653No Hit
GACTAATAGCAGATCCCTCAGCAGAATCCCTACTAGCCAGAAGAGAGTGG13.4482758620689653No Hit
CTCTGAAGCAATTGTGAATGGGAATTCACTCATGATTTGGCTCTCTGTTT13.4482758620689653No Hit
CCCTGAACGGCGAATGTCGAACACAACACAAGAGTCCAAACGACAGGCAT13.4482758620689653No Hit
GCAATAGACTGGATGATTCTGCAGACATCAAAAGTGACAGGTTTTTCGCT13.4482758620689653No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)