FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003647222

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003647222
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences29
Sequences flagged as poor quality0
Sequence length146
%GC51

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTGGTATATGCCCATGGCTGTAAGTTCATACGAGGGTTGTTCCTAATTA310.344827586206897No Hit
GGCGCAAAGCCGCACTCGACATGCGCTGCATCGATTCGGCATTGCCGGAC310.344827586206897No Hit
GAGACACGCAGCCACATATAGGCATCTCACAGACCCAGTGTGGAGTCAAA26.896551724137931No Hit
GTCGCGGATCTGCAGGCCGGTGGTGCCGGCCTCGCCATCGATGAAGACGC13.4482758620689653No Hit
GTGTCTCTCTTACCCACGTCTCAAGAGCTTCAAGATTGCTGTGCTCGTTG13.4482758620689653No Hit
TCCAATTACTGCTTAGCCTGGCGCTTACGCAATACAAACTGAACAGGCCC13.4482758620689653No Hit
GAGCAGCACCGTGTCGAGGTACACGTGCGGGTTCAGCAGCGTGAAGCCCG13.4482758620689653No Hit
TTCCTGTAGAGAAGGGAGCAGGGAGAGCCTACTATCCGAAACCATTCCCT13.4482758620689653No Hit
GTAATGACGCACTAATGAAGCGTATCGCATTGATGCAAAGCCAAGGCAAC13.4482758620689653No Hit
AATACGATGAGCGGGAGCGAAAAACCTGTCACTTTTGATGTCTGCAGAAT13.4482758620689653No Hit
GCAAGAAGGCCCATAAGGGAAGATAAGGCTTGAAAGTGGAGGTTGAGGCA13.4482758620689653No Hit
GTCATCCAGCGCCTGCGCCAGCTGGGCGCGCTGTCGGTGCGCAAGATGGA13.4482758620689653No Hit
CTCTTGTAAGGCAGGCCTGGTGGTGACAAAATCTCTCAGCATTTGCTTAT13.4482758620689653No Hit
GTACTGGATGGTTTAGATGGGCGCGTAGCACGGATGACCAATACCCAAAG13.4482758620689653No Hit
GTCTCCCAGAGCCCCTCTATCTTAGCCAGGTTGCTCAAGCTAATTTTATT13.4482758620689653No Hit
GTATTCATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGATGACA13.4482758620689653No Hit
CAGAGTGTTTCCAAACTACTCTATGAAAAGAAAGCTTAAACTCCTTGAGT13.4482758620689653No Hit
TTCCATTGCATTCCGTTCCATTACATTCCCCTGCACTCGCGTTGATTCCA13.4482758620689653No Hit
GCCCCTTGAACAGGCCCTGGTTGCCGAACAGGTAGACCAGGCTGATCGCG13.4482758620689653No Hit
GACTGGTGTCGCTTCCGGGCGCGAGACGCCTTCGGCGCAGCCGGCGGAAA13.4482758620689653No Hit
AAGATAGACAATCAACTTCCTGTCTCTGCCTGCAAATTGTAGTTATCATC13.4482758620689653No Hit
GCCGCGCAACAGGCGATTATGGTTGAGGTCGATCTTTTGGCTGTATTCCA13.4482758620689653No Hit
AACCTGATCACATCACTTTTTATGCCCAAGACTCGCCAATGGCTTCCATT13.4482758620689653No Hit
GTGGAAGACAGTAATATTGATAATCTTGACCCTGTGTAGGCCTAGCCTGT13.4482758620689653No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)