FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003647224

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003647224
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences22
Sequences flagged as poor quality0
Sequence length146
%GC51

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCGCAAAGCCGCACTCGACATGCGCTGCATCGATTCGGCATTGCCGGAC313.636363636363635No Hit
CTATACAGCCACCCAGATGCAAACCTTCAGCACTGACATAATCAACAGTA29.090909090909092No Hit
CGGCGACAGCGTGCTCAGCGCAAACGACAGCGGTGCATTCACGCGCAGCC29.090909090909092No Hit
GACTACAGGCACCCGCCACCAAGTCCGGGTCATTTTTTATATTTTTTTTT29.090909090909092No Hit
GATTGAAGGCGTGCTGTGCAGCTTAATCGCTTCCGGTCATGTACTGATTG14.545454545454546No Hit
ACCTCTCTGCCTCCCAGGCTCAAGCAATTCTCCTGCCTCAGCCTCCTGAG14.545454545454546No Hit
GCCAGGACCTGACTAAAGAGCTTCTGCACAGCAAGAGAAACTATCAACAA14.545454545454546No Hit
GCCTTGGGGTGCGGTGCAGGGGTCCAGAGCCATTTCGGACCTGTTACTAC14.545454545454546No Hit
CCACTCACACCGGACATTACCCAAGAGCGTGGCCAAGCGTACCTTGAAGC14.545454545454546No Hit
AATAACAACCCGTTCTTATCCATGTTGGTACAGCGCTGGGTTGATTAAAA14.545454545454546No Hit
GCTCAACGGCACGCTGTCTCATCCAAATATTGCTTGTCAGCCCAAGGTAG14.545454545454546No Hit
GCTTTATCTCCTCTAGGGGAGCTGGTCCTGGGCTTGGGCTCTGACATCAA14.545454545454546No Hit
CTATTATAGAAGATTCTGGTTAAGGAGGTCTGGTATGAGCTCCTTATATC14.545454545454546No Hit
GGGCTGGAAGATGAGAACCGCGGTGCCGTCGAAGTTGCGCGTCTCGGCCA14.545454545454546No Hit
GTATTCATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGATGACA14.545454545454546No Hit
ATTCCAAACAATATTAACTTCTGTATCTTGAATCTCTGGAATTTCGGCTA14.545454545454546No Hit
CTATGGAAATGGTACTTATTTTTGTACATTGGTTTTGTATCCTGAAACTT14.545454545454546No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)