FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003647228

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003647228
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences64
Sequences flagged as poor quality0
Sequence length146
%GC47

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTTTAAAAACACCTATACAACTGTTAAACTGGGACCACTGTTATTTGAAA34.6875No Hit
GCTTTGGATTGTAAATATGTTTACTTCAGAGGAAATCAGTCAGAGTGGAT34.6875No Hit
GAAAATCATTTCAGTGGGGCAAGTAGTCACCTCTAATTTCCCAGTTACCC23.125No Hit
TCCTAATGTAGGATGTTACTAGATCTGAATTTGGGCCCGGTCTCCTTTCT23.125No Hit
TCTTTTCTGCTGCCTTAACCTCTTGTCCTAAAATTGATTCTTTGGAAGCC23.125No Hit
GGTTTCTGGTGAGGCCTCTCTTTCTGGCTTGCAGATGCTGCCTTCTCTCT23.125No Hit
AACTTATACATCTTGGAGCTTTAGTGCTTTGTTTCAAAAGCCTGACCTTG23.125No Hit
CGGACGGACAAGGGCACAGAGAGGCCATCGGGCTCCCTTGCACGTCAGCC23.125No Hit
GATGAAGAGAAGCCTATGTGGAGAGGAACCAGTTGGCCAGTACCAACCCA23.125No Hit
GACCAACATGATTGTAAGCTAACTTGAACAGCTAGATTTTACAAGAAAAT23.125No Hit
CGCCATGGCCAACCCCATGGGACGCTGGAGCTGAAAAGGCCTCTCAGAGT23.125No Hit
CTTTGAGGCCAAGGGCAAAAATGTGAAAGTCCCAGGATAAAAACTAGAAT23.125No Hit
GGATAGCACAGTCCAATTAATTGCCAGGAGTATAATAGAGGTTCTCATGC23.125No Hit
GAAGGGCACCACCAGGAGTGGAGCCTGCGGCTTAATTTGACTCAACACGG23.125No Hit
GGGGTGGAGACCTAATTGGGCTGATTTGCCTGCTGCTGCTAGGAGGAGGC23.125No Hit
CACTGCTTCTTACCATCTACCTTCTGAATCTACCTACAGTGGAAATTTTC23.125No Hit
TCATTCACTTCCACAAATGACTTGTGGACAATTTTTGATATAAAAATATC11.5625No Hit
GGTAAAGGTTATTTTTTTCCCACAAATTCTTAGAAAAACTAGGGTCTTAC11.5625No Hit
CATGGATAAAGATCTAGTCATGCATTAAAAGAAAAAAAAGTTTCCTTTCT11.5625No Hit
GGTCGAGTGGTGCGGCACGAGGACGCGGTCGAAGCCCGCCGTCTCATGGG11.5625No Hit
GAGCAAAAACTATAAAACTTGAAAACATAGGCATAAATCTTCATGACCTT11.5625No Hit
GGAAATTAAGTGGGAAATGATACAGACAGAAAACTACGAACTGTCTGATG11.5625No Hit
ACAAAGGGCAAAGACGTGGCACATGGCCAGTGCCACACCTACCTGGTTGC11.5625No Hit
GCTCAGGTACTGTTTAGTTCCTGCTCCTTGTTTTGCCTAACCCACTGTTC11.5625No Hit
ACTTTGAAAAATTTGAAACCCTAGCTCTACCTCATGTAGGTTTGAAATTC11.5625No Hit
CTTATTTGCTGTATAACCTAGGGAAATTAACAGTTCGGGATTGTTCATTT11.5625No Hit
GGACTAAACTGAGGGTAGAACCATGGGATTTGGCTCCAATGGCTAAAGTG11.5625No Hit
GTTGAGTGACAGAATAGATATTCAATCCTTTAAGCCAAGAATGTATAATG11.5625No Hit
CCATCGGATGCGTCAGCCGTCCCTGCTGGCCGAGCCACCAGTCGTCGCCC11.5625No Hit
CTACCGGAGCGGCTATCTGCCCGAAGACCGGCGCGAGCTGGAGCAGTCCC11.5625No Hit
TCCAGCCGTTGGTGAAGTTGGCGATGACGTCCTCCAGGCCCCAGAACATG11.5625No Hit
CCCAGTAGGTTAATAGTGGGGGGTAAGGCGAGGTTAGCGAGGCTTGCTAG11.5625No Hit
GGTTATAGGCGTGAGCCACCGCGCCCGGCCATGCCTCCAAAGCTTTTGCC11.5625No Hit
TAGCACAGTTTAGTCGGATACCTTTCTGATAGCTTGGAATGTAGTGATCA11.5625No Hit
GGATATTAAGTGGGAAATGATACAGACAGAAAACTACGTACTGTCTGATT11.5625No Hit
TTCTGCTACTTATTTCCACCTTTTGTCCTGTTCCTGGGGCCCATGCCTTC11.5625No Hit
GGTATGGGACCCCGTGGCTTCACAGGTGCCCTCAGTCTGGCTCTGCTGCT11.5625No Hit
GCGCCATACGGTCGCCGACGTTGCGGACGAGGTCACGTCCGGCGTCGTCC11.5625No Hit
CTACCGGAGCGGCTATCTGCCCGAAGAACGGCGCGAGCTGGAGCAGTCCC11.5625No Hit
GGGTATAGAACGTGCGCTGCACTTCCAGACCATGGAGCGTTCTCGTGCCC11.5625No Hit
CCCCCCGGGAATCGCCTTGAGGCGCTGCATGGGGATCGCGCCGGCCAGTA11.5625No Hit
CAGGTGTACCGCCCCAGTCAAACTCCCCACCTGGCACTGTCCCCGGAGCG11.5625No Hit
GCGTTGGGACGAGGAGGACATCGATATCCCCCTCAGGATTATTGCTTCTC11.5625No Hit
ATAATCAGACCGATGTGTACTTATTAGGAAGCAAGTTTAAAAATTTGGAT11.5625No Hit
ACGTTGAAACTTGGATCCCAGAGATGAAGCCGGCTTAATCATGGTGGATA11.5625No Hit
GTGTGTTTCCCCCAGTCGGGGCCTGGACCTGGGGTGGCCATGGACTTACT11.5625No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)