FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003647229

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003647229
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences20
Sequences flagged as poor quality0
Sequence length146
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTTAAAAAGCTCGTAGTTGGATCTTGGGAGCGGGCGGGCGGTCCGCCGCG210.0No Hit
AATACAGACCGTGAAAGCGGGGCCTCACGATCCTTCTGACCTTTTGGGTT210.0No Hit
ATCAAAAGAAAGGTTCAACTCTGGGAGATGAATGCGCACATCACAAAGAA15.0No Hit
ACGCTGATCCCGTGCGGCGTTCCATGCCGCTTTTCCATCACGTACCAAGC15.0No Hit
CACTATCATTGTTAAAAATGGCAGAGACCTCGTTTGTGCTTCGTGGAGAT15.0No Hit
TTGTTATATCTCCTTCTCACCATTGGCTATGAAAGTATTCTCCAAATTCC15.0No Hit
GTCACACCATTTATAACTTTTTGACACTGTAGTATCATTATTACTGTAAG15.0No Hit
GTTAAAATGATACACAACCTTATTTATTGATTTTTTATTTGGAGGTAATT15.0No Hit
TTCGAGGATTTCGCGGCGTGCGATCCAGCAAAGAAGCATGTCAGTTGCTC15.0No Hit
ATACAGAATGACATTCATGCAAGTTCTTCCCTGAATGGCAGAAGCACTGA15.0No Hit
ATGTGAGCCGTGTGGCAATCCAATACAGGGGCATAGCCGGCGCTTATTTG15.0No Hit
CCCTTAGCCCTTCCTGCCCTTTCTTCTTCTGGAGTCCCCAGTGTCATTTA15.0No Hit
TCTCCGCTGGAAGAAGCACTTGCAGTAAGGCTGGTACGGACACCAATAGT15.0No Hit
GCCTGATGTTCACGCTTTAGCAAGAATGCCTTCTAATGAAGATTCACTTT15.0No Hit
ATGTGATTGCATTCAATGATGATTCCTTTCGATTGCATTCGATTATGATT15.0No Hit
CTGCCCCAGGAAACCTCTATTCTACTTTCTGTTCAAATCACTTTCTGTGT15.0No Hit
ATTCTCAGGAACTACTTTGTGATGTTTGCAACGAAATCCTCAAAGCTATC15.0No Hit
AAGTACAACCCTCTGGAGTCTCTGATCAAAGACGTGGATTGGTTCCTGCT15.0No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)