FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003647230

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003647230
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences20
Sequences flagged as poor quality0
Sequence length146
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCCTATTAGTGGGTGAACAATCCAACGCTTGGTGAATTCTGCTTCACAAT210.0No Hit
TCTTAATCATGGCCTCAGTTCCGAAAACCAACAAAATAGAACCGCGGTCC210.0No Hit
CATCGAATGGAACTGAATGGAATCTTTGAATGGATTCGATTGGAATCATC15.0No Hit
GACTCTTCTTGTCCAAATTGTTCCATAGAATCACAGTAAACTTCACTGTC15.0No Hit
CCATGGAATACTATGCATCCATAAAAAGCATGAAATCATGTCCTTTATAG15.0No Hit
CCCCTAAAGTGAACCTCAACCTGTGCCTTATACAAATTTAATGCAAAATG15.0No Hit
CAGCGCACCCTGGCGATCCTTCAGCGCCAGTTGCCCAGCCGGTGTCTTCA15.0No Hit
GATTTAAGACCTATGGATAAAAATGAAATATCTTTACACAAAAACTAGAC15.0No Hit
CTCCCTTTGTAGAATCTGCAGGTGGATATGTGGATAGATTTTAAGATTTC15.0No Hit
GCTTACCGGCCTTCATTGCCTCAAGCAGATAAGACTTTGCAGGTTCAATA15.0No Hit
GCTATATCTGTGTTTTAAAACATATCTAACTCTTACCTAAAAGTCATTAT15.0No Hit
AAACCAAGGATGTATTTCTTTGAAAAGATAAAACAAGAGGGCTAATCATC15.0No Hit
GTGGTATCAACGCAGAGTACATGGAGAGAGGAGCATGAAGACGATAGGAA15.0No Hit
GCCCTCATGTGCTGCAGGTAGAGGGACTGCAGCACATGAGGGCATAGGAT15.0No Hit
CCTTTGCTCCAGTCAACGTTACAACGGAAGTAAAATCTGTCGAAATGCAC15.0No Hit
GTGCATGTAGTGTATATATTTTGCATGCTTTGATGTGTATAATTCAGGAT15.0No Hit
AAGGAAAAGTAGAACGCGTAAGTGCTCAAGCATCTTCAAGCGGAGATATC15.0No Hit
CTTTAAAAGAAATATGGCGCAGGTTAACATTTGCTTGGAGAGGGTAATCC15.0No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)